Symphalangus syndactylus (siamang): 129482657
Help
Entry
129482657 CDS
T10134
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04140
Autophagy - animal
ssyn04142
Lysosome biogenesis
ssyn04145
Phagocytosis
ssyn04148
Efferocytosis
ssyn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129482657 (VPS18)
04142 Lysosome biogenesis
129482657 (VPS18)
04140 Autophagy - animal
129482657 (VPS18)
04148 Efferocytosis
129482657 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129482657 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129482657 (VPS18)
Membrane trafficking [BR:
ssyn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129482657 (VPS18)
Hops complex
129482657 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
WD40_Prp19
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129482657
NCBI-ProteinID:
XP_055134733
LinkDB
All DBs
Position
5:65838439..65848864
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKIRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGRPDSLLAYLEQAGVSPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEQLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgagaactcgctgtcccgctcggccgtcttgcagccc
ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa
gtgcccatcttcacaaagcagcgcattgacttcaccccttccgagcgcatcaccagtctt
gtcgtctccagcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggcaaatgagcccaaccacgtggagctgggacgtaaggatgacgcaaaagtt
cacaagatgttccttgaccatactggctctcacctgctgattgccctgagcagcacggag
gtcctctacgtgaaccgaaacggacagaagatacggccactagcacgctggaaggggcag
ctggtggagagtgtgggttggaacaaggcactgggcacggagagcagcacaggccccatc
ctggtcgggactgcccaaggccacatcttcgaagcagagctctcagccagcgaaggtggg
ctttttggccctgctccggatctctacttccgcccattgtacgtgctaaatgaagaaggg
ggtccagcacctgtgtgctcacttgaggccgagcggggccctgatgggcgtagctttgtt
attgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggggctgag
gcccagggtttctcagggctctttgcagcttacacggaccacccacccccattccgtgag
tttcccagcaacctgggctacagtgagttggccttctacacccccaagctgcgctctgca
ccccgggccttcgcctggatgatgggggatggtgtgttgtatggggcattggactgtggg
cgccctgactctctgctgagcgaggagcgagtctgggagtacccagagggggtagggcct
ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacactgaccgggcaggtggtgctgcgggatcacttcctg
gagaaatttgggccgctgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccacgtgcaacgggaggcccgagatgtctggcgc
acctatctggacatgaaccgcttcgatctggccaaagagtattgtcgagagcggcccgac
tgcctggacactgtcctggcccgggaggccgatttctgctttcgccagcgtcgctacctg
gagagcgcacgctgctatgccctgacccagagctactttgaggagattgccctcaagttc
ctggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccagtttg
aagccagccgaacgtacccaggccacgctgctgaccacctggctgacagagctctacctg
agccggcttggggctctgcagggcgacccagaggccctgaccctctaccgagaaaccaag
gaatgctttcgaaccttcctcagcagcccccgccacaaagagtggctctttgccagccgg
gcttctatccatgagctgctcgccagtcatggggacacagagcacatggtgtactttgca
gtgatcatgcaggactatgagcgggtagtggcttaccactgtcagcacgaggcctacgag
gaggccctggccgtgctcgcccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatcccccgccagcttgtagatgcctggattgagatgggcagccgg
ctggatgctcggcagctcattcctgccctggtgaactacagccagggtggtgaggtccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggggagactgag
caggccatccacaactacctgctgtcgctgtatgcccgtggccggccggactcactgctg
gcctatctcgagcaggctggggtcagcccccaccgggtacattacgacctcaagtatgcg
ctgcggctctgcgccgagcatggccaccaccgcgcttgtgtccatgtctacaaggtccta
gagctatatgaggaggctgtggacctggctctgcaggtggacgtggacctggccaagcag
tgtgcagacctgcctgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaagatgtgcagacagccatggcttgcctggctagctgc
cccctgctcaagattgaggatgtgctgcccttctttcctgatttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggctacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctacggcactgtagagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccatatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgccagcctacaagcaggcccggctggaggagctgcagagg
aagctgggggctgctccacccccagccaagggctctgcccgggccaaggaggccgaaggt
ggggctgccacagcagggcccagccgggaacagctcaaggctgacctggatgagttggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctattgaccggccgttcatc
gacccccagcgctacgaggaggagcagctcagttggctgtag
DBGET
integrated database retrieval system
