Symphalangus syndactylus (siamang): 129482678
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Entry
129482678 CDS
T10134
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04517
IgSF CAM signaling
ssyn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129482678
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129482678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssyn04812
]
129482678
Cytoskeleton proteins [BR:
ssyn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129482678
Intermediate filaments
Intermediate filament-binding proteins
129482678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
FAM133
PH
PH_9
IRF
Motif
Other DBs
NCBI-GeneID:
129482678
NCBI-ProteinID:
XP_063494569
LinkDB
All DBs
Position
5:complement(66824044..>66859864)
Genome browser
AA seq
2921 aa
AA seq
DB search
CAHSCTKEKQDHPVAHVNPTAMARSRGPIXSXGPTIQDSLSQPKPIWEEVQEQLEKKGAK
ALYAFEEKXLEKHRKKLLSESKSLSKKRXKKKKKTKKSGRYSSSSSCSDSSSSSSDSEDE
DKKHGKGRKKKNHSHKSSESSMSETESDSKDRKTIGKKDFFLKKKKDPTEKEKGLRGVWK
EKKSNFLTALAVGKGLWAEVSSSAEQLRQRYPGNSTQIQRQQEELSQRWGQLEALKREKA
VQLAHSAEVCSFLQECGPTQVQLRDVLLQLEAPQPGSSEDTRHALQLAQKKTVVLERRVH
LLQRVVVKVEESGHAESQPLQGQVETLQGLLKQVQERVAQQARGQAEAQARQSFLQESRQ
LLLWAESVQAQLHSQEELVDVASAQQLLREHQDLLEEIHLWQERLQQLDAQSQPMAALDC
PDSQEVANTLRLLGQQGQELKAVWEQRRQWLQEGLELQKFGREVDGFTATCANHQAWLHL
DNLGEDVREALSLLQQHREFGRLLSTLGPRAEALWAHGEKLVQSQHPAAHTVREQLQSVQ
AQWTRLQGRSEQRRRQLLASLQLQEWKRDVAELMQWMEEKGLMVAHEPSGARRNILQALK
RHKAAESELLATRRHVEALQQVGRELLSRRPCGQEDIQTRLQGLRSKWEALNRKMTERGD
ELRQAGQQEQLLRQLQDAKEQLEQLEGTLQSSETGQDLCSSQRLQKRHHQLESESRTLAA
KMAALASKAHGVAASPAILEETQKHLQRLELLQGHLAIRGLQLQASVELHQFCRLSNMEL
SWVAEHMPHGSPTSYTECLNGAQRLHRKHKELQVEVKAHQGQVQRVLSSGWSLAASGHPQ
AQHIVEQCQELEGHWAELERACEVRAQCLQQAVAFQQYFLDVSELESWVEEKRPLVSSQD
YARDEAATLRLIKKHQALREELAIYWSSMEELEQRAQTLTGPKVTEQQRVVRERLREQLR
ALQELVATRDRELEGTLRLHKFLRETEDLQSWLARQKQEAEGGESLGEDPEHALRLCTKF
AKFQRQVEMGSKRVAACRLLAESLVERGHTAGPMVRQRQQDLQATWSELWELTQARGHAL
RDAETTLRVHRDLLEVLTQVQEKATSLPNSVAWDLRGLEAQLRSHQGLERELVGTEQQLQ
ELLETAGRVQKLCPGPQAHAVQQRQQAVMQAWAVLQQRVEQRRTQLERARLLARFRTAVR
DYTSWAARVRQDLQVEESSQEPSSGPLKLNAHQWLQAELEAREKLWQQAAQLGQQALLAA
GTPTKEVQEELRALQDQRDQVYQAWARKQERLQAEQQEQLFLRECGRLEEILAAQEVSLK
TSALGSSVEEVEQLIRKHEVFLKVLTAQDKKEAALRERLKMLQRPRVRDRLPILLQRRVR
VKELAESRGHALHASLLMASFTRAATQAEDWIQAWAQQLKEPIPPGDLRDKLKPLLKHQA
FEAEVQAHEEVITSVAKKGEALLAQSHPRAAEVSQWLQGLRKHWEDLRQAVALRGQELED
RRNFLEFLQRVDLAEAWIQEKEVTMNVGDLGQDLEHCLQLRRRLREFRGTSAGDTVGDAR
IRSISDLSLQLKNRDPEEVKIICQRRSQLNNRWASFHGNLLRYQQQLEGALEIHTLSREL
DNVTERIQEKEALMQALDCGKDLESTQRLLRKHEELEREVHLIQAQVESLEHEVGRLCQR
SPEAAHSLRHRQQEVAESWWQLLSRAQKRREALDALHQAQELQATLQELLVGAQRLRAQM
DTSPAPHSPVEARHMLEEHQERKAELDSWADSISLARSTGQRLLTAGHPSSSDIRQALAG
LEQELSSLEGAWQEHQLQLQQALELQLFLSSVEKMERWLCSKEDSLASEGLWDPLDPMEP
LLWKHKMLERDLEVQAGKISTLEATARGLHHGGHPEAQSALGSCQAMLRRKEVLFRQAGT
RRRRLEELQQLQAFLQDSQEVATWLREKNLVALEEGLLDTATLPAQLRKQQNFQAELDAS
MHQQQELQREGQRLLQGGHPASEAIQERLEELEALWGELQDNFQKKVAKLQKACEALHLR
RSMEELENWLEPIEVELRAPTVDQALPGVGELLGTQRELEAAVDKKARQAEALLGQAQAF
MREGHCLAQDVEEQARQLLQRFKSLREPLQERRTALEARSLLLQFFRDADEEMAWVQEKL
PLAAAQDYGQSLSAVRHLQEQHQNLESEMSSHEALTRVVLGTGHKLVQAGHFAAHEVATR
VQQLEKAMAHLRAEAARRRLLLQQAQEAQQFLTELLEAGSWLAERGHVLDSEDMGHSAEA
TQALLRRLEATKRDLEAFGPRIERLQQTAALLESRKNPESPKVLAQLQAVREAHAELLRR
AEARGHGLQEQLQLHQLERETLLLDAWLTTKAATAESQDYGQDLEGVKVLEEKFDAFRKE
VQSLGQAKVYALRKLAGTLERGAPRCCPHIQAQRSRIEAAWERLDQAIKARTENLAAAHE
VHSFEQAAAELQGRMQEKTALMKGEDGGHSLSSVRTLQQQHRRLERELAAMEKEVARVQT
EACRLGQLHPAAPGGLAKVQEAWATLQAKAQERGQWLVQAAQGHAFLGRCQELLAWARER
QELASSEELAEDMAGAEQLLGQHEELGQEIRECRLQAQDLQQEGQQLVDDSHFMSPEVTW
CLQDLEGRLQELEEAWALRWQHCAKSWGLQKLWQRLEQAEAWLACREGLLLKPDYGHSVS
DVELLLHRHQDLEKLLAAQEEKFAQMQKTEMEQELLLQPQELKPGRAGSSLTSFQWRPSG
HQGLGAQLAETRGPQDAKGTPTMEGSLEFKQHLLPGGRQPSSSSWDSCHGTLQGSSLSLF
LDERMAAEKVASMALLDLTGARCERLRGHHGRKHTFSLRLTSGAEILFAAPSEEQAESWW
RALGCPAAQSLSLELKAKPVSSPNECVTKDARPGCLLRSDP
NT seq
8763 nt
NT seq
+upstream
nt +downstream
nt
tgcgctcactcgtgcaccaaggagaagcaggaccatccggtagcccacgtgaatccaaca
gcaatggccagatcaaggggtccaatctagtcttaagggccaacaatccaggattctctc
agtcaaccaaagcctatctgggaagaagtgcaagagcaactagaaaagaaaggcgccaag
gctttgtatgcatttgaagaaaaaactagaaaaacacaggaagaaattgttaagtgaaag
taagagcttatccaaaaaaagaggaaaaaaaagaaaaagacgaagaaatctggtaggtat
tcgtcgtcttcatcatgctctgattcttccagcagttcttctgattctgaggatgaggat
aagaaacacggaaaagggagaaagaaaaagaaccattcacataaatcttctgaaagctcc
atgtcagaaactgaatcagacagtaaggatagaaagacaatagggaaaaaagacttcttt
ttaaagaaaaagaaagacccaactgagaaagaaaaaggcttgaggggagtgtggaaagag
aaaaagtccaacttcctcactgccctggctgtgggaaagggcctctgggctgaagtcagc
agctctgctgagcaactgaggcagagatatcctgggaactccacacaaatccaacgacag
caggaggaactgagccagaggtgggggcagctggaggccctgaagagggagaaggctgtg
cagctggcacacagtgcagaagtgtgcagttttctgcaggagtgtggacccacgcaggtc
cagctgcgagacgtgctcctccagctggaggcgccgcagccagggagctcagaggacacc
cgccacgccctgcagctggcccagaagaagaccgtggtgctggagaggagggtccacctc
ctccaaagggtggtcgtaaaggtcgaggagtcaggccacgcagagagccagcctctgcaa
ggacaggtggagacactgcaggggctgctgaagcaagtacaggaacgagtggcccaacag
gcccggggccaggctgaggctcaggcccggcagagcttcctgcaagagagccggcaactg
ctcctgtgggcagagagtgtccaggctcagctgcacagccaggaggagttggtggatgtg
gcctcggctcagcagctgctgagggagcaccaagacctgctggaggaaatccacctgtgg
caggagaggctgcagcagctggatgctcagagccagcccatggcagccttggactgccca
gactcccaagaggtggccaacactctgaggctcctggggcagcagggccaggagctgaag
gctgtgtgggagcagaggcggcagtggctgcaagaggggctggagctgcagaagtttggc
cgagaagtggatggtttcactgccacctgtgccaaccaccaggcctggctgcacctggac
aaccttggggaggacgtgagggaggccctgagcctgctgcagcagcaccgggagtttggg
cggctcctgagcaccctggggcctcgggcagaggctctgtgggcacacggcgagaagctg
gttcagagccagcacccagctgcacacacggtcagagagcagctgcagagtgtccaggca
cagtggaccaggctccaggggaggagtgagcagaggaggaggcagctgctggcttccctc
cagctccaggagtggaagcgggacgtggcggagctgatgcagtggatggaggagaagggg
ctgatggtggcgcatgagccctccggagcgcgcagaaacatcctgcaggcactcaagcgg
cacaaagcagctgagagcgagctactcgccacccgcagacacgtggaggccctgcagcag
gttgggagagagctgttgagcaggaggccctgtggccaggaggacatacagaccaggctt
caaggcctgaggagcaagtgggaagccttgaaccgcaagatgactgagcgtggggacgag
ctccggcaggctggacagcaggagcagctcctgaggcagctgcaggatgcaaaggagcag
ctggagcagctcgaagggaccctgcagagctcggaaacagggcaggacctgtgctccagc
cagaggctgcagaaacggcaccaccagctggagagtgagagccggaccctggccgccaag
atggctgcccttgcctccaaggcccatggcgtagccgcctccccagccatcctggaagag
acccagaagcacctccagaggctagagcttctgcaggggcatctggccatccggggcctg
cagctgcaggcctcagtggagctgcaccagttctgccgcctgagcaacatggagctctca
tgggtagccgagcacatgccccatggcagccccaccagctataccgagtgcttgaatggt
gcccagagacttcaccgcaagcacaaggagctccaggtggaggtaaaagctcaccagggg
caggtgcaacgggtgctgagttctgggtggagcctggcagcctcggggcacccccaagcc
caacacatcgtggagcagtgccaggagctggaaggccactgggcagagctggagagggca
tgtgaggtgcgggcccagtgtctgcagcaggctgtcgctttccagcagtactttctggat
gtgtcagagctggagagctgggtggaggagaagcggccactggtgagcagtcaggactat
gccagagacgaggcagccaccctcaggctcattaagaagcaccaggctctacgggaggaa
ctggccatttactggagctccatggaggagctggagcagagggcccaaaccctcactggc
cccaaagtcactgagcagcagcgtgtggtgcgggagaggctccgggagcagctgcgggca
ctgcaggagttggtggccacacgggaccgggaactggaggggaccctgaggctgcacaag
ttcctgagggagaccgaggacctgcagagctggctggcaaggcagaagcaggaggccgaa
ggaggggagagcctgggggaggaccccgagcacgccctgcgcctctgcaccaagtttgca
aagtttcagcgccaagtggagatgggcagcaagcgggtggccgcctgccggctgctggcg
gagagcctggtagagcgtgggcacactgctggccccatggtccgtcagaggcagcaggat
ctgcaggccacctggtcggagctgtgggagctgacccaggcccgaggccacgcgctccga
gatgccgagaccaccctcagagttcacagagatctcttggaagtcctcacccaggtccag
gagaaagccacgagcctccccaacagtgtggcgtgggacctgcgtgggctggaggctcag
ctgagaagccaccagggactggagcgagaactcgtgggcaccgagcagcagctgcaggaa
ctgctggagactgcaggcagggtgcagaagctgtgtccggggcctcaggcccatgcggtg
cagcagaggcagcaagctgtgatgcaggcgtgggcagtgctgcagcaacgcgtggagcag
cgcaggacccagctggagcgggcacgcctcctggcccgcttccgcaccgcggtgcgcgat
tacacctcctgggcagcccgcgtgcgccaggacctgcaggtggaggagagttcgcaagag
cccagcagtggcccgctgaagctcaatgcccaccagtggctccaggcggagctggaggcc
cgggagaagctgtggcagcaggccgcccagctgggccagcaggcactcctggctgcaggg
acacccaccaaggaggtccaggaagagcttcgagccctgcaggaccagagggaccaggtg
tatcaggcctgggcacggaagcaagagaggctgcaggccgagcagcaggagcagctcttc
ctcagagagtgcggccgcctggaggagatcctcgcggcccaggaggtctccctgaaaacc
agtgccttggggagctcggtggaagaggtagagcagttgattcgcaagcacgaggtcttc
ctgaaggttctgactgcccaggacaagaaggaggcagccctgcgtgagcggctgaagatg
ctccagcgcccccgggtgcgggaccggcttcccatcctgctgcagcgccgggtgagagtg
aaggagctggcggagagccggggacacgccctgcacgcctccctgctgatggccagcttc
acccgggccgcaacccaggctgaggactggatccaggcatgggcccagcagctgaaggag
ccgatccctcctggggacctgagagataagctgaagcccctgctgaaacaccaggccttt
gaggctgaagtccaggcccatgaggaggtcattacctctgttgccaagaagggagaggct
ctcctggcacagagtcaccctcgagcggcagaggtctcccagtggctgcagggcctgcgg
aagcactgggaggacctgaggcaggcagtggccctcagaggccaggagctggaggacagg
cggaacttcctggagttcctgcagagagtggacctcgcagaggcctggatccaggagaag
gaggtgacaatgaatgttggtgacctgggccaggacctggagcactgcctgcagctccga
cggcggctccgcgagttccgaggaacctcggctggggacacagtgggtgatgcccgcatc
aggagcatcagtgacttgtcgctgcagctcaagaaccgggaccctgaggaagtcaagatc
atctgccagcggcgaagccagctcaacaacaggtgggcgagtttccatggcaacctgctc
cggtaccagcagcagctcgaaggggccctagagatacacacattgtcccgagagctagac
aatgtcaccgagaggattcaggagaaggaagccctgatgcaggccctggactgcgggaag
gatctggagagcacacagaggctgctgcggaaacatgaggagctggagcgggaagtgcac
ctcatccaggcccaggtggagtccctagagcatgaagtgggccgcctctgccagagaagc
cctgaggcagcccacagcctcagacacaggcagcaggaggtagccgagagctggtggcag
ctcctgagcagggcccagaagcggagggaggcgctggatgccttgcaccaagctcaggaa
ctccaggcaacgctgcaggaattgctggtcggcgcccagaggctgcgggctcagatggac
acgagccccgctcctcacagccctgtggaagcccggcatatgttagaagagcatcaggag
cgcaaggccgagctggactcctgggcagacagcatcagcctggcccgaagcactgggcag
cgactgctcacagcggggcacccctccagctccgacattcgccaggcgctggctggctta
gaacaggagctgagcagcctggaaggggcctggcaggagcaccagctgcagctgcagcag
gccctggagctacagctgtttctgagctccgtggagaagatggaacgttggctttgcagc
aaggaagactccctagccagtgagggtctatgggaccccttggaccccatggagcccctt
ctgtggaagcacaagatgctggagcgggacctggaggtgcaggcgggaaagatcagcact
ctggaggccacggcccgcggcctgcaccacggtgggcaccccgaggcccaaagtgccctg
ggcagttgccaggccatgcttcgaaggaaggaggtgctcttcaggcaagccgggacccgc
cgccgtcgcctggaggagctccagcagctgcaggccttcctgcaggactcccaggaggtg
gccacgtggctgagggagaagaacctggtggccttggaggagggtttgctggacacagcc
acgctgccagcgcagttacggaagcagcagaatttccaggcggagctggacgcgagcatg
caccaacagcaggagctgcagcgggagggacagaggctgctgcaggggggccatccagcc
tcagaggccatccaggagcgactggaggagctggaagcactctggggtgagctgcaagac
aacttccagaagaaggtggccaagctccagaaggcctgcgaggccctgcatctgcggcgg
agcatggaggaactggagaactggctggagcccatcgaagttgagctgagagcccccact
gtggaccaggccctgcctggggtgggcgagctcctgggcacacagagggagctggaagca
gcagtggacaagaaggctaggcaggctgaggcactgctgggccaggcccaggccttcatg
agggaaggccactgccttgcccaagacgtggaagagcaggcccggcagctgcttcagagg
ttcaagagcctgagggagcccctgcaggagcgcaggacggccctggaggcccggagcctc
ctcttgcagttcttcagggacgctgatgaggaaatggcctgggtgcaggagaagctgcct
ctggccgctgcccaggactacggccagagcctgagtgcggtgcggcacctgcaggagcag
caccagaacctggagagtgagatgagcagccacgaggctctgacccgggtggtgctgggc
actgggcacaagctggtgcaggctgggcactttgccgcccacgaggtggccacccgggtg
cagcagctggagaaggccatggcccacctacgggcagaggcggcgcggaggcggcttctg
ctgcagcaggctcaggaggcccagcagtttctgactgagctcctggaggcgggatcctgg
ctggccgagcggggccatgtcctggacagcgaggacatgggccacagtgctgaggccaca
caggcgcttctgcggcggctggaggccaccaagagagacctggaagcgttcggcccacgc
atcgagcggctgcagcagacagcagcactcctggagagcaggaagaacccagaaagcccc
aaggtgctagcccagctgcaggcagttcgggaggcccacgcagagctgctgcggagggcg
gaggccagggggcacggtctgcaggagcagctgcagctacaccagctggagcgagagacc
ttgctcctcgacgcctggctgaccactaaggcagccaccgccgagtcccaggactatggg
caggacctggagggcgtcaaggtgctggaagagaagtttgatgctttcagaaaggaagtg
cagagcctgggccaggccaaggtgtatgccctgaggaaactggcaggcaccctagagcgg
ggtgcacccaggtgctgtccccacatccaagcccagaggagccgcattgaggccgcttgg
gagaggttggaccaagcaataaaagcccgcacagagaacttggctgcagcccatgaggtc
cacagctttgagcaggcagcagctgagctccagggaaggatgcaggagaagacggccctg
atgaagggagaggacggaggccacagcctgtcatctgtgcggaccctgcagcaacagcac
aggcgcctggagagagagctggcagctatggagaaggaggtggcacgggtacagacggag
gcctgccgactgggccagctacatcctgcggctccggggggcctggccaaggtgcaggag
gcctgggccaccctgcaggcgaaggcccaggagcgaggccagtggctggtgcaggctgca
cagggccatgccttcctcgggcgctgccaggaactgctagcatgggcacgggagaggcag
gagctggcgtcctccgaggagctagctgaggacatggcgggggctgagcagctccttggg
cagcatgaagagctggggcaagaaatcagggagtgccgccttcaagcccaggacctgcag
caggaaggacagcagctggtggacgacagccacttcatgtccccggaggtgacatggtgt
ctgcaggacctggaagggcggctgcaggagctggaggaggcttgggccctgcgctggcaa
cactgtgccaagagctggggcctgcagaagctttggcagaggctggagcaggctgaggcc
tggctggcctgccgggagggcctcctgctgaagcccgactatgggcactcagtgtcagat
gtggagttgctgctgcacagacaccaggacttagaaaagctgctggcagcccaggaagag
aagtttgcccaaatgcagaagacagagatggaacaggagctcctgctgcagccacaggag
ctgaaacccgggagagctggcagctcgctgacatcctttcagtggaggccctccggacac
caggggctaggagcgcagctggctgagacaaggggcccccaggatgcaaagggtaccccc
accatggaggggtctttggagttcaagcagcacctgctgcctggcgggaggcagcccagc
tcgagctcctgggacagctgccacgggaccttgcagggcagctccctgagcctcttcctg
gatgagaggatggcagcggagaaagtagcttccatggccctccttgacctcacgggagcc
cggtgtgagaggctgcggggccaccatggcaggaaacacacattctccttaaggctgacc
agtggggcagagatcctgtttgcggcaccgtccgaagagcaggctgagagctggtggcga
gccctgggctgccctgcagcccagagtctgagcctggaactcaaagccaaacctgtcagc
tctccgaatgagtgcgtgaccaaggatgcccggcctggatgtctactcaggtctgatccc
tga
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integrated database retrieval system
