Symphalangus syndactylus (siamang): 129482697
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Entry
129482697 CDS
T10134
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129482697 (UBR1)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129482697 (UBR1)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
129482697 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
ATPase_2
Motif
Other DBs
NCBI-GeneID:
129482697
NCBI-ProteinID:
XP_055134875
LinkDB
All DBs
Position
5:129552715..129730615
Genome browser
AA seq
1749 aa
AA seq
DB search
MADEEAGGTERMEISVELPQTPQRLTSWWDQQVDFYTAFLHHLAQLVPEIYFAEMDPDLE
KQEESVQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCVNHEPGRAGTIKENSRC
PLNEEVIAQARKIFPSVIKYVVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYAACQEAKEDIKSHSENVSQHPLHV
EVLHSEIMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPDSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHDRSISITALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPTIWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFISSSKTVVQLCGHSLETKSYRV
SEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVSFEDFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELAEA
FNKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEP
MPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSTVINLLNCDIMMYILRTVFERAID
TDSNLWTEGMLQMAFHILALGLLEEKQQLQKAPEEEVTFDFYHKASRLGSSAMNIQMLLE
KLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSESIKNDEITHDKEKAERK
RKAEAARLHRQKIMAQMSALQKNFIETHKLMYDNTSEMPGKEDSIMEEESTPAVSDYCRI
ALGPKRGPSVTEKEVLTCILCQEEQEVKMENNAMVLSACVQKSTALTQHRGKAIELSGET
LDPLFMDPDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLCPLC
KSLCNTVIPIIPLQPQKINSENADALAQLLTLARWIQTVLARISGYNIRHAKGENPIPVF
FNQGMGDSTFEFHSILSFGVQSSIKYSNSIKEMVILFATTIYRIGLKVPPDETDPRVPML
TWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQRHLVR
LLSVVLPNLKSEDTPCLLSIDLFHVLVGAVLAFPSLYWDDTVDLQPSSVSSSYNHLYLFH
LITMAHMLQILLTVDTGLPLAQVQEDSEEARSASSFFAEISQYTSGSIGCGMPGWYLWVS
LKNGITPYLRCAALFFHYLLGVTPPEELHTNSAEGEYSALCSYLSLPTNLFLLFQEYWDT
VRPLLQRWCADPALLNCLKQKNTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRSADDE
RKHPVLCLFCGAILCSQNICCQEVVNGEEVGACIFHALHCGAGVCIFLKIRECRVVLVEG
KARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQETNQM
LFGFNWQLL
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggaggctggaggtacggagaggatggaaatcagcgtggagttaccccag
acccctcagcgtctgacatcttggtgggatcagcaagttgatttttatactgctttcttg
catcatttggcacaattggtgccagaaatttactttgctgaaatggacccagacttggaa
aagcaggaagaaagtgtacaaatgtcaatattcactccactggaatggtacttatttgga
gaagatccagatatttgcttagagaaattgaagcacagtggagcgtttcagctttgtggg
aaggttttcaaaagtggagagacaacctattcttgcagggattgtgcaattgatccaaca
tgtgtactctgtatggactgcttccagaatagtgttcataaaaatcatcgttacaagatg
catacttctactggaggagggttctgtgactgtggagacacagaggcatggaaaactggc
cctttttgtgtaaatcatgaacctggaagagcaggtactataaaagagaattcacgctgt
ccgttgaatgaagaggtaattgcccaagccaggaaaatatttccttcagtgataaaatac
gtcgtagaaatgactatatgggaagaggaaaaagaactgcctcctgaactccagataagg
gagaaaaatgaaagatactattgtgtccttttcaatgatgaacaccattcatatgaccac
gtcatatacagcctacaaagagctcttgactgtgagctcgcagaggcccagttgcatacc
actgccatagacaaagagggtcgtcgggctgttaaagcgggagcttatgctgcttgccag
gaagcaaaggaagatataaagagtcattcagaaaatgtctctcaacatccacttcatgta
gaagtattacactcagagattatggctcatcagaaatttgctttgcgtcttggttcctgg
atgaacaaaattatgagctattcaagtgactttaggcagatcttttgccaagcatgcctt
agagaagaacctgactcggagaatccctgtctcataagcaggttaatgctttgggatgca
aagctttataaaggtgcccgtaagatccttcatgaattgatcttcagcagtttttttatg
gagatggaatacaaaaaactctttgctatggaatttgtgaagtattataaacaactgcag
aaagaatatatcagtgatgatcatgacagaagtatctctataactgcactttcagttcag
atgtttactgttcctactctggctcgacatcttattgaagagcagaatgttatctctgtc
attactgaaactctgctagaagttttacctgagtacttggacaggaacaataaattcaac
ttccagggttatagccaggacaaattgggaagagtatatgcagtaatatgtgacctaaag
tatatcctgatcagcaaacccacaatatggacagaaagattaagaatgcagttccttgaa
ggttttcgatcttttttgaagattcttacctgtatgcagggaatggaagaaatccgaaga
caggttgggcaacacattgaagtggatcctgattgggaggctgccattgctatacagatg
caattgaagaatattttactcatgttccaagagtggtgtgcttgtgatgaagaactgtta
cttgtggcttataaagaatgtcacaaagctgtgatgaggtgcagtactagtttcatatct
agtagcaagacagtagtacaattgtgtggacatagtttggaaacaaagtcctacagagta
tctgaggatcttgtaagcatacatctgccactctctaggacccttgctggtcttcatgta
cgtttaagcaggctgggtgctgtttcaagactacatgaatttgtgtcttttgaggacttt
caagtagaggtactagtggaatatcctttacgttgtctagtgttggtcgcccaggttgtt
gctgagatgtggcgaagaaatggactgtctcttattagccaggtgttttattaccaagat
gttaagtgcagagaagaaatgtatgataaagatatcatcatgcttcagattggtgcatct
ttaatggatcccaataagttcttgttgctggtacttcagaggtatgaacttgccgaggct
tttaacaagaccatatctacaaaagaccaggatttgattaaacaatataatacactaata
gaagaaatgcttcaggtcctcatctatattgtgggtgagcgttatgtacctggagtggga
aatgtgaccaaagaagaggtcacaatgagagaaattattcacttgctttgcattgaaccc
atgccacacagtgccattgccaaaaatttacctgagaatgaaaataacgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccaggtgtatcaggccatggagtt
tatgaactaaaagatgaatcattgaaagacttcaatatgtacttttatcattactccaaa
acccagcatagcaaggctgaacatatgcagaagaaaaggagaaaacaagaaaacaaagat
gaagcattgccaccaccaccacctcctgaattctgccctgctttcagcacagtgattaac
cttctcaactgtgatatcatgatgtacattctcaggactgtatttgagcgggcaatagac
acagattctaacttgtggactgaagggatgctccaaatggcttttcatattctggcattg
ggtttactagaagagaagcaacagcttcaaaaagctcctgaagaagaagtaacatttgac
ttttatcataaggcttcaagattgggaagttcagccatgaatatacaaatgcttttggaa
aaactcaaaggaattccccagttagaaggccagaaggacatgataacatggatacttcag
atgtttgacacagtgaagcgattaagagaaaaatcttgtttaattgtagcaaccacatca
ggatcggaatctattaagaatgatgagattactcatgataaagaaaaagcagaacgaaaa
agaaaagctgaagctgctaggctacatcgccagaagatcatggctcagatgtctgcctta
cagaaaaacttcattgaaactcataaactcatgtatgacaatacatcagaaatgcctggg
aaagaagactccattatggaggaagagagcaccccagcagtcagtgactactgtagaatt
gctttgggtcctaaacggggtccatctgttactgaaaaggaggtgctgacgtgcatcctt
tgccaagaagaacaagaggtgaaaatggaaaataatgccatggtattatcggcctgtgtc
cagaaatcgactgccttaacccagcacaggggaaaagccatagaactctcaggagaaacc
ctagacccacttttcatggatccagacttggcatatggaacttatacaggaagctgtggt
catgtaatgcatgcagtgtgctggcagaagtattttgaagctgtacagctgagctctcag
cagcgcattcatgttgacctttttgacttggaaagtggagaatatctttgccctctttgc
aaatctctgtgcaatactgtgatccccattattcctttgcaacctcaaaagataaacagt
gagaatgcagatgctcttgctcaacttttgaccctggcacgatggatacagactgttctg
gccagaatatcaggttataatattagacatgctaaaggagaaaacccaattcctgttttc
tttaatcaaggaatgggagattctacttttgagttccattccatcctgagttttggcgtt
cagtcttcgattaaatattcaaatagcatcaaggaaatggttattctctttgccacaaca
atttatagaattggattgaaagtgcctcctgatgaaacagatcctcgagtccccatgctg
acctggagcacctgtgctttcactatccaggcaattgaaaatctattgggagatgaagga
aaacctctgtttggagcacttcaaaataggcagcataatggtctgaaagcattaatgcag
tttgcagttgcacagaggattacctgtcctcaggtcctgatacagagacatctggttcgt
cttctatcagttgttcttcctaacctaaaatcagaagatacaccatgccttctgtctata
gatctgtttcatgttttggtgggtgctgtgttagcattcccatccttgtattgggatgac
actgttgatctgcagccttcttcagttagttcttcctataaccacctttatctcttccat
ttgatcaccatggcacacatgcttcagatactacttacagtagacacaggcctacccctt
gctcaggttcaagaagacagtgaagaggctcgttccgcatcttctttctttgcagaaatt
tctcaatatacaagtggctccattgggtgtggtatgcctggctggtatttgtgggtctca
ctgaagaatggcatcaccccttatcttcgctgtgctgcattgtttttccactatttactt
ggggtaactccgcctgaggaactgcataccaattctgcagaaggagagtacagtgcactc
tgtagctatctatctttacctacaaatttgttcctgctcttccaggaatactgggatact
gtaaggcccttgctccagaggtggtgtgcagatcctgccttactaaactgtttgaagcaa
aaaaacaccgtggtcaggtaccctagaaaaagaaatagtttgatagagcttcccgatgac
tatagctgcctcctgaatcaagcttctcatttcaggtgcccacggtctgcagatgatgag
cgaaagcatcctgtcctctgccttttctgtggggctatactatgttctcagaacatttgc
tgccaagaagttgtgaatggggaagaggttggagcttgcatttttcatgcacttcactgt
ggagctggagtctgcattttcctaaaaatcagagaatgccgagtggtcctggttgaaggt
aaagccagaggctgtgcctatccagctccttacttggatgaatatggagaaacagaccct
ggcctgaagaggggcaacccacttcatttatctcgtgagcggtatcggaagctccatttg
gtctggcaacaacactgcattatagaagagattgctagaagccaagagactaatcagatg
ttatttggattcaactggcagttactgtga
DBGET
integrated database retrieval system
