Symphalangus syndactylus (siamang): 129483541
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Entry
129483541 CDS
T10134
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129483541 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129483541 (DCP1B)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129483541 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
129483541 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
129483541
NCBI-ProteinID:
XP_055137103
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All DBs
Position
5:152912018..152980367
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AA seq
613 aa
AA seq
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MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGTGAGISPMILNSGEGKEVDILRMLIKAKDEYTKCKTCSE
PKKITSSSAIYDNPNLIKPIPVKPSESQQQRTPQPSQTLDPEPQHLSLTALFGKQDKATC
QETVEPGQTLHQQQQQQEKLPTRQGVVRSLSYEEPKRHSPAIEKQLCPAIQKLMVRGADL
HPLSELPENRPCENGSTHSTGEFFTGPVQPGSPHNIGTSRGVQNASRTQNLFEKLQSTPG
AANKCDPSTPAPASSAALNRSRAPTSVTPVAPGKGLAQPPQAYFNGSLPPQTVGHQAHGR
EQSTLPRQTLPISGNQTGSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVLPQSS
GTGKPLESWINKTSSTEQQTPLFQVISPQRIPATAAPSLLMSPMVFAQPTSVPSKDRESG
FLPVGGQEPPAAATSLLLPIQSPEPSVITSSPLTKPQLQEALLYLIQNDDNFLNIIYEAY
LFSMTQTAMKKTM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtggcggcaggcggcctggtggggaaggggcgcgacatcagcctagcggcc
ctgcagcgccacgacccctatatcaaccgcatcgtggacgtggccagccaggtggctctg
tacaccttcggccatcgggccaacgagtgggagaaaactgatgtggaaggaaccttattt
gtttatacaaggtctgcttctccaaagcacggattcaccattatgaataggctgagcatg
gaaaataggacagaacctattactaaagacttggatttccaactccaggaccctttcctt
ctctacagaaatgccagattgtccatctatggaatttggttttatgataaggaagaatgc
caaagaattgcagagcttatgaaaaacctaactcagtatgaacagttgaaagcccatcag
ggaactggagcaggaatttccccaatgatcctcaattcaggagagggcaaagaagtagac
attttacgaatgctcatcaaggccaaagatgaatacacaaagtgtaaaacctgttctgag
ccaaaaaagataaccagttcctctgccatctatgacaatccaaatctcatcaaaccaatt
ccagtgaaacccagtgaaagccagcaacagcgtacacctcagcccagccagaccttagac
cctgaaccccaacacttatccttgacagctctgtttgggaagcaggacaaagctacatgt
caggaaactgtggagcctgggcagactctccaccagcagcagcagcagcaagagaagctt
ccaactaggcagggggttgtgcgctccctgtcctatgaagaacccaaaagacactcaccc
gccattgagaagcagctctgtccagccattcagaaactcatggtcaggggcgcagacctc
cacccattgtcagagctgcctgaaaaccggccttgtgaaaatggcagtacccattctacg
ggagaattttttacaggacctgtccagccagggtctcctcacaacattgggacttctcgt
ggtgtacaaaatgcttccagaactcagaacctgtttgagaaacttcagagtaccccaggg
gcagcaaacaagtgtgaccctagtacaccagcacctgccagctcagctgccctgaaccgc
agcagagctcccacttctgtcacccctgtggctccaggaaagggtctggctcagccacca
caggcctatttcaatggctcccttccacctcagacagtaggacatcaggctcacggaaga
gaacagtccacactcccaagacaaacactccccatctctggtaatcagactggcagttct
ggagtgatctcccctcaagagctgctgaagaagcttcagattgtgcagcaggagcagcag
ctgcatgcctctaaccggccagccttggccgctaagtttcctgtgctccctcagagctct
ggaacagggaaacccttagaatcctggatcaacaagacatccagcacagaacagcagact
cctcttttccaggtcatctcacctcagcgcatccctgctacagcagctccttctctgctc
atgtcccccatggtgttcgcacaacccacctctgtcccgtcaaaggatagggagagcggc
ttcttgcctgtgggaggccaggagccacctgctgctgccaccagcctcctcctgcccata
cagagcccggagccctccgtgatcaccagcagcccactcaccaagccccagctccaggag
gcactgctgtacctcattcagaacgatgacaacttcttaaatataatctatgaagcctat
ctcttcagcatgactcaaacagccatgaaaaagactatgtga
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