Symphalangus syndactylus (siamang): 129484987
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Entry
129484987 CDS
T10134
Symbol
SMO
Name
(RefSeq) protein smoothened isoform X1
KO
K06226
smoothened
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04340
Hedgehog signaling pathway
ssyn04360
Axon guidance
ssyn05200
Pathways in cancer
ssyn05205
Proteoglycans in cancer
ssyn05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129484987 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129484987 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129484987 (SMO)
05205 Proteoglycans in cancer
129484987 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
129484987 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssyn04030
]
129484987 (SMO)
G protein-coupled receptors [BR:
ssyn04030
]
Frizzled / Smoothened family
129484987 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
129484987
NCBI-ProteinID:
XP_055139933
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Position
6:119016768..119041513
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AA seq
790 aa
AA seq
DB search
MAAARPARGPELPLLGLLLLLLLLLLGGPGRGSASSGNATGPGPRSAGGSARRSAAVTGP
PPPLSHCGRAAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPR
CWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDRFPEG
CTNEVQNIKFNSSGQCEVPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAF
GAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRA
DGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKT
SYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGY
FLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQ
AEWERSFRDYVLCQANVTIGLPTKQPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVW
TKATLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRHELLQNPGQELSFSMHTVSHD
GPVAGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPEEQANLWLV
EAEISPELQKRLGRKKKRRKRKKEVCPLVPPPELHPPAPAPSTIPRLPQLPRQKCLVAAG
AWGAGDSCQQGAWTLVSNPFCPEPSPPQDPFLPSAPAPMAWAHGCRQGLGPIHSRTNLMD
AELMDADSDF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcccgccccgcgcgggggccggagctcccgctcctggggctgctgctgctg
ctgctgctgctgctgctggggggcccgggccgggggtcggcctcgagcgggaacgcgacc
gggcctgggcctcggagcgcgggcgggagcgcgaggaggagtgcggcggtgaccggccct
ccgccgccgctgagccactgcggccgggctgccccctgcgagccgctgcgctacaacgtt
tgcctgggctcggcgctgccctacggggccacctccacactgctggcgggagactcggac
tcccaggaggaagcgcacggcaagctcgtgctctggtcgggcctccggaatgccccccgc
tgctgggcagtgatccagcccctgctgtgtgccgtatatatgcccaagtgtgagaatgat
cgggtggagctgcccagccgcaccctctgccaggccacccgaggcccctgtgccatcgtg
gagagggagcggggctggcctgacttcctgcgctgcactcctgaccgcttccctgaaggc
tgcacgaatgaggtgcagaacatcaagttcaacagttcaggccagtgcgaagtgcccttg
gttcggacagacaaccccaagagctggtacgaggacgtggagggctgcggcatccagtgc
cagaacccgctcttcaccgaggctgagcaccaggacatgcacagctacatcgcggccttc
ggggccgtcacgggcctctgcacgctcttcaccctggccacattcgtggctgactggcgg
aactcgaatcgctaccctgctgttattctcttctacgtcaatgcgtgcttctttgtgggc
agcattggctggctggcccagttcatggatggcgcccgccgggagatcgtctgccgtgca
gatggcaccatgaggcttggggagcccacctccaatgagactctgtcctgtgtcatcatc
tttgtcatcgtgtactacgccctgatggctggtgtggtttggtttgtggtcctcacctat
gcctggcacacttccttcaaagccctgggcaccacctaccagcctctctcgggcaagacc
tcctacttccacctgctcacctggtcactcccctttgtcctcactgtggcaatccttgct
gtggcgcaggtggatggggactctgtgagtggcatttgttttgtgggctacaagaactac
cgataccgtgcgggcttcgtgctggccccaatcggcctggtgctcatcgtgggaggctac
ttcctcatccgaggagtcatgactctgttctccatcaagagcaaccaccccgggctgctg
agtgagaaggctgccagcaagatcaacgagaccatgctgcgcctgggcatttttggcttc
ctggcctttggctttgtgctcattaccttcagctgccacttctacgacttcttcaaccag
gctgagtgggagcgcagcttccgggactatgtgctgtgtcaggccaatgtgaccatcggg
ctgcccaccaagcagcccatccctgactgtgagatcaagaatcgcccgagccttctggtg
gagaagatcaacctgtttgccatgtttggaactggcatcgccatgagcacctgggtctgg
accaaggccacgctgctcatctggaggcgtacctggtgcaggttgactgggcagagtgac
gatgagccaaagcggatcaagaagagcaagatgattgccaaggccttctccaagcggcac
gagctcctgcagaacccaggccaggagctgtccttcagcatgcacaccgtgtcccatgac
gggcccgtggcgggcttggcctttgacctcaatgagccctcagctgatgtctcctctgcc
tgggcccagcatgtcaccaagatggtggctcggagaggagccatactgccccaggatatt
tctgtcactcctgtggcaactccagtgcccccagaggaacaagccaacctgtggctggtt
gaggcagagatctccccagaactgcagaagcgcctgggccggaagaagaagagaaggaag
aggaagaaggaggtgtgcccgctggtgccaccccctgagcttcacccccctgcccctgcc
cccagtaccattcctcgactgcctcagctgccccggcagaaatgcctggtggctgcaggt
gcctggggagctggggactcttgccaacagggagcgtggaccctggtctccaacccattc
tgcccagagcccagtccccctcaggatccatttctgcccagtgcaccggcccccatggca
tgggctcatggctgccgacagggcctggggcccattcactcccgcaccaacctgatggac
gcagaactcatggatgcagactcggacttctga
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