Symphalangus syndactylus (siamang): 129485236
Help
Entry
129485236 CDS
T10134
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129485236 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129485236 (TRIM71)
04121 Ubiquitin system [BR:
ssyn04121
]
129485236 (TRIM71)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129485236 (TRIM71)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129485236 (TRIM71)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129485236 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129485236
NCBI-ProteinID:
XP_055140612
LinkDB
All DBs
Position
1:complement(128108373..128192313)
Genome browser
AA seq
868 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSA
PGGPAASTSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGPGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
NDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQ
MDRPSGIAITPDGMIVVVDFGNNRILVF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgatttccagatctgcttgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtccgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccctggggcggcggcgcgccgcctacacgtcctgccc
tgcctgcacgcgttctgccgcccctgcctcgaggcgcaccggttgccggcggcgggcggc
ggcgcgccgggagagccgctcaagctacgctgccccgtgtgcgaccagaaagtagtgcta
gccgaggcggcgggcatggacgcgctgccttcgtccgctttcttgcttagcaacctgctt
gacgcggtggtggccactgccgacgagccgccgcccaagaacgggcgcgccggcgctccg
gcgggagcgggcggccacagcaaccaccggcaccacgctcaccacgcgcacccgcgcgcg
tctgcctccgcgccgccactcccgcaggcgccgcagccgcccgcgccttcccgctcggca
cccggcggcccggccgcttccacgtcggcgctgttgctccgccggcctcacggctgcagc
tcgtgcgatgaaggcaacgcagcttcttcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgagcgcaccagcgcgtgcgcctcaccaaggaccactacatcgagcgc
ggcccgccgggtcccggtgccgcagcagcggcgcagcagctcgggctcgggccgcccttt
cccggcccgcccttctccatcctctcagtgtttcccgagcgcctcggcttctgccagcac
cacgacgacgaggtgctgcacctgtactgtgacacttgctctgtacccatctgtcgtgag
tgcacaatgggccggcacgggggccacagcttcatctacctccaggaggcgctgcaggac
tcgcgggcactcaccatccagctgctggcagatgcccagcagggacgacaggcaatccag
ctgagcatcgagcaggcccagacggtggcggaacaggtggagatgaaggcgaaggttgtg
cagtcggaggtcaaagccgtgactgcgagacataagaaggccctggaggaacgcgagtgt
gagctgctgtggaaggtagaaaagatccgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcggcaaaacctcaacaagcttgagagcaccatcagtgccgtgcagcag
gtcctggaggagggtagagcgctagacatcctactggcccgagaccggatgctggcccag
gtgcaggagctgaagaccgtgcggagcctcctgcagccccaggaagatgaccgagtcatg
ttcacaccccccgatcaggcactgtaccttgccatcaagtcttttggtttcgttagcagc
ggggcctttgcaccactcaccaaggccacaggcgatggcctcaagcgcgccctccagggt
aaggtggcctccttcacagtcattggttatgaccacgacggtgagccccgcctctcagga
ggtgacctgatgtcagctgtggtcctgggccctgatggcaacctgtttggtgcagaggtg
aatgatcagcagaatgggacatatgtggtgagttaccggccccagctggagggtgagcac
ctggtatctgtgacactgtgcaaccagcacattgagaatagccctttcaaggtggtggtc
aagtcaggccgcagctacgtgggcattgggctcccaggcctgagcttcggcagtgagggt
gacagcgatggcaagctctgccgcccttggggtgtgagtgtagacaaggagggctacatc
atcgtcgccgaccgcagcaacaaccgcatccaggtgttcaagccctgcggcgccttccac
cacaaattcggcaccctgggctcccggcctgggcagttcgaccgaccagccggcgtggcc
tgtgacgcctcacgcaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
accttcgagggccagttcctcctcaagtttggtgagaaaggaaccaagaatgggcaattc
aactacccttgggatgtggcggtgaattctgagggcaagatcctggtctcggacacgagg
aaccaccggatccagctgtttgggcctgatggtgtcttcctaaataagtatggcttcgag
ggggctctctggaagcactttgactccccacggggtgtggccttcaaccatgagggccac
ttggtggtcactgacttcaacaaccaccggctcctggttattcaccccgactgccagtcg
gcacgctttctgggctcggagggcacgggcaatgggcagttcctgcgcccacaaggcgta
gctgtggaccaggaagggcgcatcattgtggcggattccaggaaccatcgggtacagatg
tttgaatccaacggcagcttcctgtgcaagtttggtgctcaaggcagcggctttgggcag
atggaccgcccttccggcatcgccatcacccccgacggaatgatcgttgtggtggacttc
ggcaacaatcgaatcctcgtcttctaa
DBGET
integrated database retrieval system
