Symphalangus syndactylus (siamang): 129486088
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Entry
129486088 CDS
T10134
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129486088 (SOX30)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129486088 (SOX30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129486088
NCBI-ProteinID:
XP_055141427
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Position
7:29226922..29255137
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AA seq
753 aa
AA seq
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MERARPEPSPQPRPLRPGPPPLPVEGTSFWAAAMEPPPSSPTLSAAASAPLASSCGEAVA
SGLQPAVRRLLQVKPEQVLLLPQPQARNEEAAASPAQARLLQFRPDLRLLPPPAALDGAT
SRPELHPVQPLVLHFKAKKQELGPSLHQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG
DEKGKLKAEEVMKEAMKGGEGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA
EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPIKMQS
LLEPSVKIETKDVSLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP
AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV
PNVFSGTTQNIVSTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQRSS
PVTLFQPSVSSAAQVAVQDPSLPLYPALPPQRFAEPSQTDTHQLHSEAAHTVKQPTPVSL
ESTNRISSSASTAHARFATSTIQPPKEYSSISPCPRSAPIPQASAIPHPHVYQPPPLGHP
ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSVPECLSYYEDRYPKHE
GVFSALNRDYSFRAYSSECTHSENSRSCDNMNGTSYHNSHSYSGEEDLNPVPQLDIGTLE
NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccagaccggagccgtcgcctcagccgcgcccgttgcgtcccggtccgccc
ccgctgccggtcgagggcacctccttttgggcagcagccatggagcctcctccgtcgtct
cccacactgagcgcggccgccagtgcgcccttggcctcgtcgtgcggggaggccgtggcg
tccggcttacagcccgcggtgcggcggctgctgcaggtgaagccagagcaggtgttgctg
ctaccacagcctcaggcccggaacgaggaagcggctgcttcgcccgcgcaggcgcggctg
ttgcagttcaggcccgacctgcggctcttgccgccgccagcagcgttagacggcgccacc
tccaggcccgagttgcacccggtgcagcccctggtgctgcacttcaaggccaagaagcag
gagctggggcccagcctgcatcagtcagtggggcctcggggggccgtcgaaaccggtcct
agagcctccagggtggtcaagttggaaggccctgggccggccctcggctacttccgaggg
gacgagaagggcaagctgaaggcggaggaggtcatgaaagaagcgatgaaaggcggggaa
ggcaaaagcccggcggccatccgagaaggtgtgatcaaaacggaggaacccgagagactc
ctcgaggactgcaggcttggcgcggagcccgcgtccaatggcctggttcatggcagcgcg
gaggtcatcttggccccaacgtccggtgcctttgggccgcaccagcaagaccttaggatc
cctttgactctccacacggtcccccctggggcccggatccagtttcagggagctccgcct
tcagagctgataagattgaccaaggtccccctgacaccagtgcctattaaaatgcagtcc
ctactggagccttctgtaaaaattgaaaccaaagatgtctcgctcaccgtgttgccctca
gatgcaggcataccagatactcccttcagtaaggacagaaatggtcatgtgaagcgaccc
atgaacgcatttatggtttgggcaaggatccaccgaccagcactagccaaagctaaccca
gcagccaacaatgcagaaatcagtgtccagcttgggttagagtggaacaaacttagtgaa
gaacaaaagaaaccctattacgatgaagcacaaaagattaaagaaaagcacagagaggaa
tttcctggttgggtttatcagcctcgtccagggaagcgaaaacgattccctctaagtgtt
cccaatgtattttctggtaccacacagaatatcgtctctacaaatcctacaacagtttat
ccttaccgctcacctacatactctgtggtaattcccagcctacagaatcccatcactcat
ccagttggtgaaacctcacctgctatccagctgcccacacctgcagtccagcgctcaagc
cctgtcacacttttccagcccagcgtctccagtgctgctcaggtggctgtccaggatcca
agtctacctctctatccagcactcccaccccaacgctttgctgagccttcccaaacagac
actcatcagctgcattctgaagccgctcacactgtgaagcaacccacccctgtctctcta
gagagcaccaacaggatttcaagtagtgcaagtactgcccatgccagatttgcaacttcg
accatccaacctcctaaggagtattccagcatttccccttgtcccagaagtgctccaatc
ccccaggcttctgccattccacacccacatgtctaccagccccctccccttggccatcca
gccacactgttcgggacaccaccaagattctcttttcatcacccttacttcctacccgga
cctcactacttcccatcaagtacatgcccttacagtcggcctccctttggctatggaaat
tttccgagttcagtgccagaatgccttagttattatgaagacaggtacccaaaacatgag
ggtgtattttcagctttaaatagagactattcttttagagcctactcaagtgaatgcaca
cacagcgaaaattctcggagttgtgacaacatgaatggaacttcttaccataacagtcat
agctacagtggggaagaagacttaaaccctgtgcctcagctggacattggaaccttggag
aatgtcttcacagccccgacatcaactccttccagcatccagcaagtcaatgtcactgac
agtgatgaggaggaagaagaaaaagtgctcagggatttataa
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