KEGG   Symphalangus syndactylus (siamang): 129486114
Entry
129486114         CDS       T10134                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
ssyn  Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129486114 (GEMIN5)
   03041 Spliceosome [BR:ssyn03041]
    129486114 (GEMIN5)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     129486114 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     129486114 (GEMIN5)
Spliceosome [BR:ssyn03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    129486114 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_EML WD40_Gbeta Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd MIOS_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_Nup120_160 Tricorn_2nd
Other DBs
NCBI-GeneID: 129486114
NCBI-ProteinID: XP_055141478
LinkDB
Position
7:31947098..31998590
AA seq 1508 aa
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPGAGESPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPR
VKDLLVSGDEKGVVFCYWFNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEETSEEAEITNGNAVAQAPVTKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGAGIDPTVKERLWLTLHWPSNQPTQLV
SSCFGGELLQWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSSVDIGSLAIGVGDSMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYSLAWGP
PVTPMSLVGEGDRPSLALYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSIKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESSPESPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDALREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVHKWLTSMQDHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTVRTPVKLESIDGNEEESVKENSGPFENGVSDQ
EGEEEAREPELPCGLAPAVSREPVICTPVSSGFEKSKVTINNKVILLKKEPPKEKPETLI
KKRKARSLLPLSTSLDHRSKEELHQDCLVLATAKHSKELNEDVSADLEERFHLGLFTDRA
TLYRMIDIEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLLAMAPAAGYHV
WLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAIAKARLRPEDP
VLKDLYFSWGTVLERDGHYAIAAKCYLGATCAYDAAKVLAKKGDAASLRTAAELAAIVGE
DELSASLALRCAQELLLANNWVGAQEALQLHESLQGQRLVFSLLELLSRHLEEKQLSEGK
SSSSYHTWTTGTEGPFVERVTAVWKSIFSLDTPEQYQEAFQKLQNIKYPSATNNTPAKQL
LLHICHDLTLAVLSQQMASWDEAVQALLQAVVRSYDSGSFTIMQEVYSAFLPDGCDHLRD
KLGDHQSPATPAFKSLEAFFLYGRLYEFWWSLSRPCPNSSIWVRAGHRTLSVEPSQQLDT
ASTEETDPETSQPEPNRPSELDLRLTEEGERMLSTFKELFSEKHASLQNSQRTVAEVQET
LAEMIRQHQKSQLCKSTANGPDKNEPEAEAEQPLCSSQSQCKEEKNEPLSLPELTKRLTE
ANQRMAKFPESIKAWPFPDVLECCLVLLLIRSHFPGCLAQEMQQQAQELLQKYGNTKTYR
RHCQTFCT
NT seq 4527 nt   +upstreamnt  +downstreamnt
atggggcaggagccgcggacgctgccgccctcccccaactggtactgcgcccgctgcagc
gatgccgtgcccgggggcctctttggcttcgccgcgcggacctccgtcttccttgtccgc
gtgggcccgggcgcaggcgagagtccagggacacccccgtttcgagtcataggagagttg
gtgggacacaccgaaagggtctctggcttcacattttctcatcaccctggtcagtacaat
ctctgtgccaccagctccgacgatgggactgtgaaaatatgggatgtagagacaaaaaca
gttgtgacagaacatgcactccatcagcatacgatatcaacattacattggtctcctcga
gtaaaggacttactagtatctggggatgaaaaaggagtagttttctgttactggtttaac
agaaatgatagccagcacctctttatagaacccaggacaattttctgtcttacttgttca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggtgataattgac
atcagtaagaaaggagaagttattcataggcttcgaggccatgatgatgaaatccactcc
atagcctggtgtcccctgcctggtgaagattgtttatctataaaccaagaggaaacttca
gaagaagctgaaattaccaacgggaatgctgtagcacaagctccagtaacaaaaggctgc
tacttagccactggaagcaaagatcaaaccattcgaatctggagctgttctagaggccga
ggggtgatgattttgaaattgccctttctgaagagaagaggagcgggtatagacccaact
gttaaagagcgcctttggttgacactccattggcccagcaatcagccaacacagctggta
tctagctgttttggaggtgaactgttgcaatgggatctcactcaatcttggagacggaaa
tacaccctcttcagtgcctcatcagaagggcaaaatcattcaagaattgtgtttaattta
tgtcctttacaaacagaggatgacaaacagctattactttctacatcaatggatagagat
gtaaaatgttgggacatggccaccctggagtgctgctggaccctgccttcccttggtggg
tttgcatacagcctggctttctcttctgtggatataggctctttggccataggtgttggg
gatagcatgatccgtgtgtggaatacactctccataaagaacaactacgatgtgaaaaat
ttttggcaaggtgtcaagtccaaggttacagcgctgtgttggcacccaaccaaggaaggt
tgcttagcttttggaactgatgatggaaaagtgggattgtatgacacctactccaacaag
cctccacagatttctagcacatatcataagaagactgtatattctttagcctgggggcca
ccagtaacccccatgtcacttgtaggagaaggagacagaccttcccttgctttatacagc
tgtggaggagaagggattgtcttacagcataacccctggaagcttagtggagaagccttt
gacatcaacaaactcatcagggacaccaattcaatcaaatacaaattgcctgtacacaca
gagataagttggaaagcagatggcaaaatcatggctcttggcaatgaagatggatcaata
gaaatatttcaggttcccaacctgaaactgatctgtactatccaacagcatcacaagctt
gtgaataccattagctggcatcatgagcatggcagccagccagaactgagctatctgatg
gcctctggctctaacaatgcagtcatttatgtgcacaacctgaagactgtcatagagagc
agccctgagtctccagtgaccattacagagccctaccggaccctctcagggcatacagcc
aagattaccagtgtggcgtggagcccacatcatgatggaaggctggtatctgcttcctat
gatggtacagcccaggtgtgggatgctctccgggaagagcccctgtgcaatttccgagga
catcgaggtcgactgctttgtgtggcgtggtctcctttggatccagactgcatctattca
ggggcagatgacttttgtgtgcacaagtggctcacttccatgcaagatcattcccggcct
cctcaaggcaaaaaaagtattgaattagagaaaaaacggctctctcaacctaagccaaag
cctaaaaagaagaaaaagcccaccgtgagaactcctgtaaagctggaatcgattgatgga
aatgaagaagagagcgtgaaggagaactcgggaccttttgagaatggtgtgtcagaccaa
gaaggggaggaggaagcacgggagccggaattaccctgtggccttgctccagcggtttct
agagaaccagttatctgcactccagtttcctcaggctttgaaaagtcaaaagtcaccatt
aataacaaagtcattttactgaaaaaggagccaccaaaagagaagccagaaaccttaatc
aagaagagaaaagctcgttccttgcttcccctgagtacaagcctggaccacagatccaaa
gaggagcttcatcaggactgtttggtactagcaactgcaaagcactccaaagagctgaat
gaagatgtgtctgctgatcttgaggaaagatttcatctggggcttttcacagacagggct
accctgtacagaatgattgatattgaaggaaaaggtcacttagaaaatggccaccctgag
ttatttcaccagcttatgctttggaaaggagatctcaaaggtgttctccagactgcagca
gaaagaggggagctgacagacaaccttctggctatggcaccagcagctggctaccatgtg
tggctatgggctgtggaagcttttgccaaacagctgtgctttcaggatcagtatgtcaag
gctgcttctcacctactttccatccacaaagtgtatgaagctgtggagctgctcaagtca
aaccatttttacagggaagctattgcaattgccaaggcccggctgcgcccagaagaccca
gtcctaaaggacttgtacttcagctggggaaccgtcctagaaagagatggccactatgcc
atagcagccaaatgctatttaggggccacttgtgcttatgatgcagccaaagttttggcc
aaaaagggggatgcagcatcacttagaacggctgcagagttggctgccatcgtaggagag
gatgagttgtctgcttccctggctctcagatgtgcccaagagctacttctggccaacaac
tgggtgggagcccaggaagccctgcagctgcatgaaagtctacagggtcagagattggtg
ttttcccttctggagctactgtccaggcatctggaggaaaagcagctttcagagggcaaa
agctcctcctcttaccacacttggaccacgggcaccgaagggcctttcgtggagagggtg
actgcagtgtggaagagcatcttcagccttgacacccctgagcagtatcaggaagccttt
cagaagctgcagaacatcaagtacccatctgctacaaataacacgcctgccaaacagctc
ctgcttcacatttgccatgacttgaccctggcagtgctgagccaacagatggcctcctgg
gacgaggctgtgcaggcgctccttcaggcagtggtccggagctatgactcagggagcttc
accatcatgcaggaagtgtactcagcctttctccctgacggctgtgaccacctaagagac
aagttgggggaccatcaatcccctgccacaccagctttcaaaagtttggaggcctttttt
ctttatgggcgtctgtatgaattctggtggtctctctccaggccttgcccaaattccagt
atctgggtaagagctggtcacagaacactctctgtagagccaagccagcagttagacact
gccagcactgaagaaacggaccctgaaacttctcagccagagccaaacaggccttcagaa
ctagacttgagactcacagaagaaggtgagcgaatgctgagtacttttaaggagctcttt
tcagaaaagcatgccagtctccaaaactcacagagaactgttgctgaagtccaagagacc
ttggcagaaatgatccgccaacaccagaagagtcaactctgtaaatccacagcaaatggt
cctgataagaatgaaccggaagcagaagcagagcagcccctctgcagttctcagagccaa
tgtaaagaagaaaaaaatgagccactttctctgcctgaattaaccaaaaggcttacagag
gcaaatcagagaatggcgaaatttcctgagagcattaaggcctggcccttcccagatgtg
ctggagtgctgccttgtcctgcttctcatcaggtcccactttcctggctgcctggcccag
gaaatgcagcagcaggcccaagagctccttcagaaatatggcaacacgaaaacttataga
agacactgccagaccttctgcacgtga

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