Symphalangus syndactylus (siamang): 129486369
Help
Entry
129486369 CDS
T10134
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssyn01002
]
129486369 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129486369 (VCPIP1)
Enzymes [BR:
ssyn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129486369 (VCPIP1)
Peptidases and inhibitors [BR:
ssyn01002
]
Cysteine peptidases
Family C64
129486369 (VCPIP1)
Ubiquitin system [BR:
ssyn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
129486369 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129486369
NCBI-ProteinID:
XP_055142153
LinkDB
All DBs
Position
7:51410236..51450014
Genome browser
AA seq
1223 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTPPSLASASAAASGGLLKRRDRRILSGSCPDPKCQARLF
FPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKV
MGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVG
YGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALR
ENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVL
HRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLV
GIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEE
VFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELH
VPPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACN
WCHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWG
GRVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKN
PDDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQN
ITEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRI
TTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVP
LQHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLL
ATLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRL
ELCVDAAGHFPIGPDVEDLVKEAVSQVRAEAITRSRESSPSHGLLKLGSGGVVKKKSEQL
HNVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNS
ELIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQR
KTEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSV
EELEEMDSQDAEMTNTTEPMDHS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgccgcctccgctgccgccgccacctcctccccctgaggctcca
cagactccgccgtccctggcgtcggcgtcggcggctgcttcgggggggcttttgaagcgg
agagaccggagaatcctttccgggagctgcccggatccgaagtgccaggcgcgtctgttt
ttcccggcctccggttctgtcagcatcgagtgtaccgagtgcggccagcggcatgagcag
caacagctgctgggggttgaagaggtgaccgacccggacgtagtgctacacaacctgctg
cggaacgcgctgctcggggtgacgggggcacccaagaagaacacggaactggtaaaggtg
atgggcctttccaactatcactgcaaattgttgtcgcccatattagctcgctatggaatg
gacaaacagacaggccgggccaagcttctccgggacatgaaccagggcgaactgttcgat
tgcgccttactgggtgaccgcgccttcctcatagaaccagagcatgttaacactgtgggc
tatggcaaagaccgctccggaagcctcctgtatttgcatgacactctggaggacattaag
cgggccaataaaagtcaggaatgtctcattccagtgcatgtggacggggatggacactgc
ctggtgcatgctgtgtctcgggctctagtaggccgagagctcttctggcatgccttaaga
gagaatcttaaacagcactttcagcagcacctggcccgatatcaagctctgttccatgac
ttcattgatgctgctgagtgggaggacattatcaatgagtgtgaccctctgtttgtacca
cctgagggtgttcccttgggcctgaggaatatccacatatttggtcttgccaatgtgcta
catcgtcctattattctgttagattccctcagtggcatgagaagctctggtgattattca
gccacctttctacctgggctcatccctgcagagaagtgcactgggaaagatggtcatttg
aacaaaccaatctgtattgcatggagcagctccggtagaaaccattatatccccttggta
ggcataaaaggggctgctttgcccaaactgcctatgaatttgcttcctaaagcatggggt
gtgcctcaggaccttattaaaaagtacataaaacttgaagaggatggtggttgtgttatt
ggaggtgacagaagtttgcaagataaatacttacttaggcttgttgctgctatggaagaa
gtctttatggacaaacatggtatccatcctagcttggttgctgatgtccatcagtatttc
tacagaaggactggagtgataggagttcagcctgaagaagtcacagcagctgctaaaaaa
gcagtaatggataatcgccttcacaaatgtttgctctgtggtgccctttcagaacttcat
gttcctccagagtggttggctcctggagggaaattgtataacctggcaaaaagtactcat
ggacagctgaggactgacaaaaattatagctttcccttgaacaatttggtttgctcatat
gattcagtgaaagatgttctggtgccagactatggaatgagtaacctaacagcttgtaat
tggtgccatggcacatctgtgcgaaaggtcagaggagatgggtctattgtgtatttggat
ggagacagaactaattctaggtccactggtggcaaatgtggttgtggattcaaacacttt
tgggatggtaaggagtatgacaatctaccagaagctttccctattactttagaatggggt
ggaagagtggtcagagaaacagtatattggttccagtatgaaagtgattcatctttgaat
agtaatgtttacgatgttgcaatgaaacttgttaccaagcactttccaggtgaatttggg
agtgaaatcctagttcagaaagttgtccacactatattgcatcagactgccaaaaagaat
cccgatgattatactcctgtaaatatagatggtgctcacgcccaaagagttggagatgtt
caaggacaagaatcagagtctcagctcccaactaaaattattcttactggacagaaaaca
aaaactttgcacaaggaggagttaaacatgagtaaaactgaaagaactattcaacagaat
attacggaacaggcttctgtaatgcagaaacggaaaacagagaagttaaaacaagaacaa
aaagggcaacccaggactgtttctcccagtaccattcgtgatggtccatcctctgcacct
gctacacctaccaaggctccctattcacctacaacttctaaggagaagaagatccgaatc
acaactaatgatggacgacagtccatggttacccttaagtcttcaacgaccttttttgaa
cttcaggaaagtatagccagagaattcaacattcctccatatttacagtgtattagatac
gggtttcctcctaaagagttaatgccaccacaggcaggaatggaaaaggaaccagttcct
ttacagcatggcgacagaattacaatagaaattctaaaaagtaaagctgaaggtggtcag
tctgctgcagcacactcagcccacactgtgaaacaagaagatattgctgttactggtaaa
ctgtcatctaaggaacttcaggagcaagctgaaaaagaaatgtactccttgtgtctttta
gcaacattaatgggagaagatgtatggtcttatgcaaagggacttcctcacatgtttcag
cagggtggtgtattctacagtattatgaagaaaaccatgggtatggctgatggcaagcat
tgtacttttccacatctgcctggcaaaacctttgtctataatgcttctgaagatagactg
gaattgtgtgtggatgctgcaggacacttccccattggtcctgatgttgaagatttagtc
aaagaggctgtaagtcaggttcgagcagaggctattacaagaagtagggaatcaagtccc
tcacatgggctattaaaactaggtagtggtggagtagtgaaaaagaaatctgagcaactt
cataacgtaactgcctttcagggaaaagggcattctttaggaactgcatctggtaaccca
caccttgatccaagagctagggaaacttcagttgtaagaaagcataatacagggacagac
tttagtaatagttccactaaaacagagccttctgtattcacagcttcttctagtaatagt
gagcttattcgaatagctcctggagtagtaacaatgagagacggtaggcagcttgatcct
gatttggttgaggcccagcgaaaaaaattgcaggaaatggtttcttctattcaggcttca
atggacaggcaccttcgggatcaaagtacagagcagtcaccatctgatcttcctcaaagg
aaaacagaagttgtgagttcttctgcaaagtctgggagtcttcagactggcttgcctgaa
tcttttcctttaactggtggtactgaaaatttgaatacagaaacaactgatggctgtgta
gcagatgcgctgggagcagcctttgccacaaggtcaaaagcacaaaggggaaattctgtg
gaggagcttgaagagatggatagtcaagatgctgagatgactaacacaactgagccaatg
gatcactcttga
DBGET
integrated database retrieval system
