Symphalangus syndactylus (siamang): 129487404
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Entry
129487404 CDS
T10134
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn00100
Steroid biosynthesis
ssyn01100
Metabolic pathways
Module
ssyn_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129487404 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssyn01006
]
129487404 (FDFT1)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129487404 (FDFT1)
Prenyltransferases [BR:
ssyn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129487404 (FDFT1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
129487404
NCBI-ProteinID:
XP_055144030
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All DBs
Position
1:complement(149309820..149357197)
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AA seq
468 aa
AA seq
DB search
MAAAACGTKAMALFKRTLVLSPAAAPRGPGAGTAPRGCCLPPAAWPCKDWPRGEGGRLWS
RLPQSHSHSCSSTSPTAVCLVCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAV
CIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTIS
LEFRNLAEKYQTVIADICRRMGTGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSA
SEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFTKP
ENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQV
FKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQ
NLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcaccaaggcgatggccctcttcaagcgcaccttggtgctg
agtcccgccgcggcgcccaggggcccaggcgcaggcaccgccccgcggggctgctgcttg
cctcctgccgcctggccctgcaaggactggccccggggagagggcggcaggctgtggagc
cgcctgccccagtcccactcccactcctgctcctcgacgtctcccaccgccgtgtgtctt
gtctgcccgcaggactcgctcagcagcagcctgaaaacttgttacaagtatctcaatcag
accagtcgcagtttcgcagctgttatccaggcgctggatggggaaatgcgcaatgcagtg
tgcatattttatctggttctccgagctctggacacactggaagatgacatgaccatcagt
gtggaaaagaaggtcccgctgttacacaactttcactctttcctttaccaaccagactgg
cggttcatggagagcaaggagaaggatcgccaggtgctggaggacttcccaacgatctcc
ctcgagtttagaaatctggctgagaaataccaaacagtgattgctgacatttgccggaga
atgggaactgggatggcagagtttttggataagcatgtgacctctgaacaggagtgggac
aagtactgccactatgttgctgggctggtaggaattggcctttcccgtcttttctcggcc
tcagaatttgaagaccccttagttggtgaagatacagaacgtgccaactctatgggcctg
tttctgcagaaaacaaacatcattcgtgactatctggaagaccagcaagaaggaagagag
ttttggcctcaagaggtttggagcaggtatgttaagaagttaggggattttactaagccg
gagaatattgacttggctgtgcagtgcctgaatgaacttataaccaatgcactgcaccac
atcccagatgtcatcacctacctttcgagactcagaaaccagagtgtgtttaacttctgt
gctattccacaggtgatggccattgccactttggctgcctgttacaataaccagcaggtg
ttcaaaggggcagtgaagattcggaaagggcaagcagtgaccctgatgatggatgccacc
aatatgccagctgtcaaagccatcatatatcagtatatggaagagatttatcatagaatc
cccgactcagacccatcttctagtaaaacaaggcagatcatctccaccatccggacgcag
aatcttcccaactgtcagctgatctcccgaagccactactcccccatctacctgtcgttt
gtcatgctcttggcagctctgagctggcagtacctgaccacactctcccaggtaacagaa
gactatgttcagactggagaacactga
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