Symphalangus syndactylus (siamang): 129487470
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Entry
129487470 CDS
T10134
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04136
Autophagy - other
ssyn04140
Autophagy - animal
ssyn05010
Alzheimer disease
ssyn05014
Amyotrophic lateral sclerosis
ssyn05016
Huntington disease
ssyn05017
Spinocerebellar ataxia
ssyn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129487470 (ATG2B)
04136 Autophagy - other
129487470 (ATG2B)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
129487470 (ATG2B)
05014 Amyotrophic lateral sclerosis
129487470 (ATG2B)
05016 Huntington disease
129487470 (ATG2B)
05017 Spinocerebellar ataxia
129487470 (ATG2B)
05022 Pathways of neurodegeneration - multiple diseases
129487470 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129487470 (ATG2B)
03029 Mitochondrial biogenesis [BR:
ssyn03029
]
129487470 (ATG2B)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
129487470 (ATG2B)
Mitochondrial biogenesis [BR:
ssyn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129487470 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
FKBP_N
Motif
Other DBs
NCBI-GeneID:
129487470
NCBI-ProteinID:
XP_055144232
LinkDB
All DBs
Position
8:20702866..20783134
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPRPRPATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGTALEIRIERTLYCDETADESSGINVHQPTAFAHKLLQLSGVSLFWDEFSASAKSS
PVCSTAPVETEPKLSPSWNPKIVYEPHPQLTRNLPEIAPSDPVQIGGLIGRLELSLTLKQ
NEVLPGAKLDVDGQIDSIHLLLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSVGVSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGDPPNMDLELSLTSTYTNTPAGSPLSATVLQPTWGEFLDHHKEQPVRGSTFPSNL
VHPTSLQKTPLPSRSVSVDESRPELIFRLAVGTFSISVLHIDPLSPPETSQNLNPLTPMA
VAFFTCIEKIDPARFSTEDFKSFRAVFAEACSHDHLRFIGTGIKISYEQRQRSASRYFST
DMSIGQMEFLECLFPTDFHSVPPHYTELLTFHSKEETGSHSPVCLQLHYKHSENRGPQGN
QARLSSVPQKAELQIKLNPVCCELDISIVDRLNSLLQPQKLATVEMMASHMYTSYNKHIS
LHKAFTEVFLDDSHSPANCRISVQVATPALNLSVRFPIPDLRSDQERGPWFKKSLQKEIL
YLAFIDLEFKTEFIGGSTPEQIKLELTFRELIGSFQEEKGDPSIKFFHVSSGVDGDTTSS
DDFDWPRIVLKINPPAMHSILERIAAEEEEENDGHYQEEEEGGAHSLKDVCDLRRPAPSP
FSSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELTLPNIYVTLPNKSFYEKLYNR
IFNDLLLWEPTAPSPVETFENISYGIGLSVASQLINTFNKDSFSAFKSAVHCDEESGSEE
ETLQYFSTVDPNYRSRRKKKLDSQNKNSQSFLSVLLNINHGLIAVFTDVKQDNGDLLENK
HGEFWLEFNSGSLFCVTKYEGFDDKHYICLHSSSFSLYHKGIVDGVILPTETRLPSSTRP
HWLEPTIYSSEEDGLSKTSSDGVGGDSLNMLSVAVKILSDKSESNTKEFLIAVGLKGATL
QHRMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPIRSLL
TVETFSVSSSAALDKSSSTLRIILDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTIT
AVKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDLQTPNKADMKPG
AFQRRSKVESSGRSSSRGPVLPEADQQMLRDLMSDAMEEIDMQQATSSVKPQANGVLDEK
SQIQEPCCSDLFLFPDESGNVSQEPGPTYASFSHHFISDAMTGVPNENDDFCILFAPKAA
MQEKEEEPVIKIMVDDAIVIRDNYFSLPVKKTDTSKAPLHFPVPVIRYVVKEVSLVWHLY
GGKDFGTVPPTSPAKSYISPHSSPFHTPTRHGRNTVCGGKGRNHDFLMEIQLSKVKFQHE
VYPPCKPDCDSSLSEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNML
TVKALHVCPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELQMTPDAEV
KKSPGADVTCSLPRHLSTSKEPNLVISFSGPKQPSQNDSANSVEAVNGMEEKNFSAEEAS
FRDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLSYRHG
LLGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKTRRFPHH
RLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGMTGAVGEVLRQIPPAVV
KPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGDD
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgttttcggagtctatcaagaagagggcctgccggtacctcctgcagagg
tacctgggccactttctgcaggagaagctgagcctggaacagctcagcctggacctgtat
caaggcaccgggtccctcgcccaggtccccttggacaaatggtgtctcaatgagatcttg
gagtcagcagatgcacccttagaagtcactgaaggattcattcagtcaatttccctgtca
gttccatggggctctttactgcaggataattgtgcactggaagtgagaggattagaaatg
gtcttccggcctagacctcgcccagcaactggttctgagcctatgtattggtcaagtttt
atgaccagcagtatgcaattggcaaaagaatgtcttagccagaaactaacagatgaacaa
ggagaaggatcccagccttttgaaggacttgaaaagtttgctgaaaccattgaaacagta
ctaagaagagtaaaagtcacttttatagatactgttttgagaattgaacatgtgccagaa
aattccaaaactggaactgcacttgaaattcgaatagaaagaactctgtactgtgatgaa
actgctgacgaatcctcaggaattaatgtgcatcaacccactgcttttgctcacaagtta
cttcagctctctggagtgtctctcttctgggatgagttttctgcatcagcaaaatcttcc
ccagtgtgttcaactgcaccagtggaaactgagccaaagctgtcacctagctggaacccc
aaaattgtttatgagccacacccacagctaactagaaatttaccagagatagcaccttct
gacccagtgcaaattggagggttaattggtaggttggagttgagtctcacgttgaaacag
aatgaagtgcttcctggagctaagttggatgttgatggacagatagactctattcatcta
ctcctgtcaccaagacaggtgcacttgcttttggatatgttggcagctattgctggacca
gaaaattctagcaaaatagggttagctaataaagataggaaaaatcgacccatgcagcag
gaagacgagtatcgaattcagatggaattaaaccggtattatttgagaaaagattccctc
tctgtgggtgtatcttcagagcaaagcttttatgagacagaaacagctcgtacaccttct
agccgtgaagaagaagtattcttctccatggctgatatggacatgtctcatagtctctct
tctcttccaccccttggggaccccccaaacatggaccttgagttatcattaactagtaca
tatacaaataccccagcaggatctccattaagtgctactgtgcttcagcccacttgggga
gagttccttgatcatcataaagaacagccagtaagagggtcaacatttccatccaaccta
gttcacccaacatctttacagaagacacctctcccatctagatctgtttcagtggatgaa
tcaaggcctgaacttatttttagactagctgtgggaactttttcaatctctgtgcttcac
attgatcctttatctccacctgaaacgtcacagaaccttaatccattgacacctatggca
gtagctttctttacttgtatagaaaagattgatccagcaagattttcaacagaagatttt
aagtctttccgagcagtgtttgcagaagcttgctcacatgatcaccttagatttataggt
actggcattaaaatatcctatgaacaaagacaaagatcagcttcccggtattttagtact
gatatgtccattgggcaaatggaatttttggagtgcctatttccaactgattttcattct
gttcctcctcactatacagagcttttaacgttccattccaaagaagaaactggttcccat
tcccctgtgtgtcttcagcttcattataagcattctgagaatagagggccccagggtaat
caagcaagacttagttcagttcctcagaaggcagaattgcaaattaaattaaatccagtg
tgttgtgagctggatatcagtattgtggacaggttaaattctttgcttcaaccacagaaa
cttgccacagtagagatgatggcatcccacatgtatacttcatataataaacatattagt
ctgcacaaggctttcactgaagtgtttctagatgattcacatagtcctgcaaattgtcgg
atatcagtacaagttgccacaccagcattaaacctttctgttcgcttcccaatacctgat
cttcgatccgatcaagaaagaggaccatggtttaagaagtcacttcagaaggagatcctt
tatttagccttcatagatctagaatttaagactgaatttataggaggatcaaccccagaa
caaattaaattggaacttacctttagagaactaattggatcgttccaggaagagaaagga
gatccatctattaagtttttccatgtgtctagcggagtagatggagatacaacatcgtca
gatgactttgactggccacgaattgtactgaaaataaatccaccagccatgcattccatt
ttggagagaattgcagctgaagaagaagaggagaatgatggtcactaccaggaggaagag
gaaggaggtgctcattccttgaaagatgtttgtgatctaagaagaccagccccatctcct
ttttcttctcgtagagtaatgtttgaaaatgaacagatggtgatgccaggagaccctgta
gaaatgacagaatttcaggataaagcaatcagcaattctcactatgtgctggaacttacg
ttaccaaatatttatgtaacactacctaataagagcttttatgagaagctttataatagg
atctttaatgacttgctgctgtgggaaccaacagctccttcaccagtagagacattcgag
aatatttcctatggcattgggctttcagtagccagtcagctcattaatactttcaacaaa
gatagttttagcgcatttaaatctgcagttcactgtgatgaggaaagtggatctgaggag
gagactttgcagtatttttccactgttgatcccaactatcgttctcgcaggaaaaaaaaa
ttagactctcagaacaagaactctcagagttttctctcagttcttctgaatattaatcat
ggattaatagccgtgttcacagatgtgaagcaagataatggagatctgttggaaaacaag
catggtgaattctggttagagttcaatagtggttcattattttgcgtgacaaaatatgaa
ggttttgatgacaagcactacatttgccttcattctagcagtttcagtctataccataaa
ggcatagtggatggagtgattctcccgacagaaacacgacttcccagctcaacccgtcca
cactggttggaacctactatttattcctctgaagaagatggcctcagtaaaacttcttca
gatggagttggaggagacagtttgaatatgctgtctgttgccgttaaaatattgtctgat
aaatcagaatccaatacaaaggaatttctcattgctgtaggactgaaaggagccactctc
cagcatagaatgcttccttctgggcttagctggcatgagcagattttatacttcttgaat
attgctgatgaacctgttttgggatataatcctccaacttcatttacaacttttcatgtt
catctttggagctgtgcacttgattatagacccctttatttgccaatccgatctcttctt
accgtggaaacattcagtgtttctagtagcgctgcattggataaatcttcctctactctc
agaataatcttggatgaagctgctttacatctatctgacaaatgcaatactgtcactata
aatctgaatagagattatgttcgtgtgatggatatggggcttttggagttaaccattact
gcggtgaagtctgattctgatggagagcaaactgagccccgctttgagttacactgttcc
agcgatgttgtccatatcagaacgtgctcagactcttgtgctgcattaatgaatctcatt
cagtacattgcaagctatggtgacttgcagacacctaacaaggcagatatgaagcctgga
gcctttcaaagaaggtctaaggtagagtccagtggtcgatcatcctcacgtggtccagta
cttcctgaagcagatcaacaaatgttacgagatctgatgagtgatgctatggaggagatc
gacatgcaacaagccacctcgtcagtaaaaccacaggctaatggtgttttggatgaaaaa
tctcaaattcaggagccatgttgttcagacctcttcctgtttcctgatgagagtgggaat
gtatcccaggagcccggccccacctatgcctcattctctcaccatttcatcagtgatgca
atgacaggtgtgcccaatgagaatgatgacttttgcattctttttgcaccaaaagcagcc
atgcaggagaaggaagaagaaccagttataaaaatcatggttgatgatgcaattgtgata
agagacaattatttcagtctgcccgttaagaagactgatacgagcaaagcccccttacac
tttcccgttcctgtgattcgctatgtggtgaaggaggtctctcttgtctggcatctttat
ggaggaaaggattttggaacagtccctcccacttctccggctaaaagttatattagtccc
cacagttcgccttttcatacacccacaagacatggacgtaatacagtatgtgggggaaaa
ggaaggaaccatgactttttaatggaaatacagctaagcaaggtgaagtttcagcatgaa
gtctaccccccctgcaaacctgactgtgattccagcctctcagaacacccagtctcccgg
caggtgttcattgttcaggatcttgagattcgagatcgtttggcgacatcacaaatgaat
aaatttttatatctgtattgcagtaaagaaatgcctcggaaagctcactccaacatgttg
acagtgaaagccttacacgtgtgtccggaatctggcaggtccccacaagagtgctgcttg
agagtgtcgctgatgccgctccgcctcaatattgaccaggatgccttgttcttcctgaag
gatttcttcacaagtctttctacagaagtagagcttcaaatgactccagatgcagaagtt
aaaaagtctcctggagctgatgtcacctgcagtttgccaaggcatttgagtacctcaaag
gagccaaatctggttatttctttctctgggccaaaacagccttcccaaaatgatagtgcc
aattcagtggaagcagttaatggcatggaagagaagaacttctctgctgaagaagcatct
tttagggatcagcctgtgttttttagagaatttagattcacgtcagaagttcccattcga
cttgattatcatgggaaacatgtatcaatggatcagggtacactagctgggattttaatt
ggtctggctcagttaaactgctctgaactaaagctcaagaggctttcctatcgacatggt
ttactaggtgttgacaaattattctcatatgcaatcactgagtggcttaatgacattaag
aagaaccagctaccaggaatcctgggaggtgttggacctatgcattcactagtacaatta
gtacaaggcctaaaggacttggtctggctcccaatagagcagtaccggaaggatggccgc
attgtcagagggtttcagagaggtgctgcttcctttggtacctcgacagcgatggctgct
ctagaactcacaaacagaatggttcaaaccatacaggcagctgcagagactgcttatgat
atggtgtctcctggtaccctttctatcgagcccaagaagaccagaaggtttcctcatcat
cggttagcccaccagccagtagacctgagggaaggtgtggccaaggcctacagtgttgtg
aaagagggaatcacagacacggctcagaccatttatgaaactgcggctcgagaacacgag
agcagagggatgactggtgccgtgggcgaggttctgcgccagattcctccggcagtggtg
aaacctctgattgttgccacagaagcaacgtcaaacgtgttgggtggcatgagaaaccaa
attaggccagatgtccggcaagacgagtcacagaaatggcgccacggggatgactga
DBGET
integrated database retrieval system
