Symphalangus syndactylus (siamang): 129487485
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Entry
129487485 CDS
T10134
Symbol
DICER1
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn05206
MicroRNAs in cancer
Brite
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129487485 (DICER1)
microRNA pathway
RISC loading complex
129487485 (DICER1)
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GFIT
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NCBI-GeneID:
129487485
NCBI-ProteinID:
XP_055144251
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Position
8:21898631..21968102
Genome browser
AA seq
1923 aa
AA seq
DB search
MNEKPCFATLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHN
TIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDL
KVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHL
AILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATD
LVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLIS
KQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALC
EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDD
EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI
TGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL
PTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGET
DIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELP
DGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKET
VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTT
PLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLS
LQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMED
IEKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSK
FPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEK
RKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAG
VGVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANR
TSSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQG
NQLNYYKQEIPVQPTTSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPLMA
VMPGTTDAIQVLKGRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYE
DDFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFE
DFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSI
ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNNQQKNLSV
SCAAPSVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKN
KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL
VNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE
EDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLE
MEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQV
PNS
NT seq
5773 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccc
tgcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatga
taacatttatacgccaagaaaatatcaggtcgaactgcttgaagcagctctggatcataa
taccatcgtctgtttaaacactggctcagggaagacatttattgcagtactactcactaa
agagctgtcctatcagatcaggggagacttcagcagaaatggaaaaaggacggtgttctt
ggtcaactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatct
caaggttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagagatggaa
ccaagagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgtttt
gaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatct
tgcaatcctagaccacccctatcgagaaattatgaagctctgtgaaaattgtccatcatg
tcctcgcattttgggactaaccgcttccattttaaatgggaaatgtgatccagaggaatt
ggaagaaaagattcagaaactagagaaaattcttaagagtaatgctgaaactgcaactga
cctggtggtcttagacaggtatacttctcagccatgtgagattgtggtggattgtggacc
atttactgacagaagtgggctttatgaaagactgctgatggaattagaagaagcactcaa
ttttatcaatgattgtaatatatctgtacattcaaaagaaagagattctactttaatttc
gaaacagatactatcagactgtcgtgccgtattggtagttctgggaccctggtgtgcaga
taaagtagctggaatgatggtaagagaactacagaaatacatcaaacatgagcaagagga
gctgcacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactatg
tgaagagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaatcaa
actgctcgaaatcttacgcaaatataaaccatatgagcgacaacagtttgaaagcgttga
gtggtataataatagaaatcaggataattatgtgtcatggagtgattctgaggatgatga
tgaggatgaagaaattgaagaaaaagagaagccagagacaaattttccttctccttttac
caacattttgtgcggaattatttttgtggaaagaagatatacagcagttgtcttaaacag
attgataaaggaagctggcaaacaagatccagagctggcttatatcagtagcaattttat
aactggacatggcattgggaagaatcagcctcgcaacaaacagatggaagcagaattcag
aaaacaggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaac
aagtattgtagaagagggtgttgatataccaaaatgcaacttggtggttcgttttgattt
gcccacagaatatcgatcctatgttcaatctaaaggaagagcaagggcacctatctctaa
ttatataatgttagcggatacagacaaaataaaaagttttgaagaagaccttaaaaccta
caaagctattgaaaagatcttgagaaacaagtgttccaagtcggttgatactggtgagac
tgacattgatcctgtcatggatgatgatgacgttttcccaccatatgtgttgaggcctga
cgatggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgc
tagattaccaagtgatccgtttactcatctagctcctaaatgcagaacccgagagttgcc
tgatggtacattttattcaactctttacctgccaattaactcacctcttcgagcctccat
tgttggtccaccaatgagctgtgtacgattggctgaaagagttgtagctctcatttgctg
tgagaaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagac
tgttaaatatgaagaagagcttgatttgcatgatgaagaagagaccagtgttccaggaag
accaggttccacgaaacgaaggcagtgctacccaaaagcaattccagagtgtttgaggga
tagttatcccaaacctgatcagccctgttacctgtatgtgataggaatggttttaactac
acctttacctgatgaactcaactttagaaggcggaagctctatcctcctgaagataccac
aagatgctttggaatactgacagccaaacccatacctcagattccacactttcctgtata
cacacgctctggagaggttaccatatccattgagttgaagaagtctggtttcatgttgtc
tctacaaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcg
gcttgaaaaacctgctctagaatttaaacctacagacgctgattcagcatactgtgttct
acctcttaatgttgttaatgactccagcactttggatattgactttaaattcatggaaga
tattgagaagtctgaagctcgcataggcattcccagtacaaagtatacaaaagaaacacc
ctttgtttttaaattagaagattaccaagatgccgttatcattccaagatatcgcaattt
tgatcagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactcagtaa
atttccttcccctgagtatgaaacttttgcagaatattataaaacgaagtacaaccttga
cctaaccaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatct
tttgacacctcgacatttgaatcagaaggggaaagctcttcctttaagcagtgctgagaa
gaggaaggccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgc
tatacatccgattccagcatcactgtggagaaaagctgtttgtctccccagcatacttta
tcgccttcactgccttttgactgcagaggagctaagagcccagactgccagcgatgctgg
cgtgggagtcagatcacttcctgcggattttagataccctaacttagacttcgggtggaa
aaaatctattgacagcaaatctttcatctcaatttctaactcctcttcagctgaaaatga
taattactgtaagcacagcacaattgtccctgaaaatgctgcacatcaaggtgctaatag
aacctcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgctcagcga
gtcccctggtaagctccatgttgaagtttcagcagatcttacagcaattaatggtctttc
ttacaatcaaaatctcgccaatggcagttatgatttagctaacagagacttttgccaagg
aaatcagctgaattactataagcaggaaatacccgtgcaaccaactacctcatattccat
tcagaatttatacagttatgagaaccagccccagcccagcgatgaatgtactctcctgag
taataaataccttgatggaaatgctaacaaatctacctcagatggaagtcctttgatggc
cgtaatgcctggtacgacagacgctattcaagtgctcaagggcaggatggattctgagca
gagcccttctgttgggtactcctcaaggactcttggccccaatcctggacttattcttca
ggctttgactctgtcaaacgctagtgatggatttaacctggagcggcttgaaatgcttgg
cgactcctttttaaagcatgccatcaccacgtatctattttgcacttaccctgatgctca
tgagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcgcct
tggaaaaaagaagggactgcccagccgcatggtggtgtcaatatttgatccccctgtgaa
ttggcttcctcctggttatgtagtaaatcaagacaaaagtaacacagataaatgggaaaa
agatgaaatgacaaaagactgcatgttggcgaatggcaaactggatgaggattacgagga
ggaggatgaggaggaggagagcctgatgtggagggctccgaaggaagaggctgactatga
agatgatttcctggagtatgatcaggaacatatcagatttatagataatatgttaatggg
atcaggagcttttgtaaagaaaatctctctttctcctttttcaaccactgattctgcata
tgaatggaaaatgcccaaaaagtcctccttaggtagtatgccgttttcatcagattttga
ggattttgactacagctcttgggatgcaatgtgctatctggatcctagcaaagctgttga
agaagatgactttgttgtggggttctggaatccatcagaagaaaactgtggtgttgacac
gggaaagcagtccatttcttacgacttgcacactgagcagtgtattgctgacaaaagcat
agcggactgtgtggaagccctgctgggctgctatttaaccagctgtggggagagggctgc
tcagcttttcctctgttcattggggctgaaggtgctcccggtaattaaaaggactgatcg
ggaaaaggccctgtgccctactcgggagaatttcaacaaccaacaaaagaacctttcagt
gagctgtgctgctccttctgtggccagttcacgctcttctgtattgaaagacttggaata
tggttgtttgaagattccaccaagatgtatgtttgatcatccagatgcagataaaacact
gaatcaccttatatcggggtttgaaaattttgaaaagaaaatcaactacagattcaagaa
taaggcttaccttctccaggcttttacacatgcctcctaccactacaatacgatcactga
ttgttaccagcgcttagaattcctgggagatgcgattttggactacctcataaccaagca
cctttatgaagacccgcggcagcactccccgggggtcctgacggacctgcggtctgccct
ggtcaacaacaccatctttgcatcgctggctgtaaagtacgactaccacaagtacttcaa
agctgtctctcctgagctcttccatgtcatcgatgactttgtgcagtttcagcttgagaa
gaatgaaatgcaaggaatggattctgagcttaggagatctgaggaggatgaagagaaaga
agaggatattgaagttccaaaggccatgggggatatttttgagtcgcttgctggtgccat
ttacatggatagtgggatgtcactggagacagtctggcaggtgtactatcccatgatgcg
gccgctaatagaaaagttttctgcaaatgtaccccgttcccctgtgcgagaattgcttga
aatggaaccagaaactgccaaatttagcccggctgagagaacttacgacgggaaggtcag
agtcaccgtggaagtagtaggaaaggggaaatttaaaggtgttggtcgaagttacaggat
tgccaaatctgcagcagcaagaagagccctccgaagcctcaaagctaatcaacctcaggt
tcccaatagctga
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integrated database retrieval system
