Symphalangus syndactylus (siamang): 129487795
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Entry
129487795 CDS
T10134
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04066
HIF-1 signaling pathway
ssyn04137
Mitophagy - animal
ssyn04140
Autophagy - animal
ssyn04148
Efferocytosis
ssyn04659
Th17 cell differentiation
ssyn04919
Thyroid hormone signaling pathway
ssyn05167
Kaposi sarcoma-associated herpesvirus infection
ssyn05200
Pathways in cancer
ssyn05205
Proteoglycans in cancer
ssyn05208
Chemical carcinogenesis - reactive oxygen species
ssyn05211
Renal cell carcinoma
ssyn05230
Central carbon metabolism in cancer
ssyn05231
Choline metabolism in cancer
ssyn05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
129487795 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129487795 (HIF1A)
04137 Mitophagy - animal
129487795 (HIF1A)
04148 Efferocytosis
129487795 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129487795 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
129487795 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129487795 (HIF1A)
05205 Proteoglycans in cancer
129487795 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
129487795 (HIF1A)
05230 Central carbon metabolism in cancer
129487795 (HIF1A)
05231 Choline metabolism in cancer
129487795 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
129487795 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
129487795 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
129487795 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129487795 (HIF1A)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129487795 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
129487795
NCBI-ProteinID:
XP_055145134
LinkDB
All DBs
Position
8:complement(55474171..55527527)
Genome browser
AA seq
850 aa
AA seq
DB search
MSSQCRSLGDKFVFLKEGLGNSKPEELEEIRIENGRISSERRKEKSRDAARSRRSKESEV
FYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKAL
DGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVK
KGREQNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPP
MTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIY
EYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIV
CVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDA
LTLLAPAAGDTIISLDFGSNDTETDDQQLEEVPLYNDVMLPSPNEKLQNINLAMSPLPTS
ETPKPLRSSADPALNQEVALKLEPNPESLELSFTMPQIQDQPPSPSDGSTRQSSPEPNSP
SEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRS
FDQLSPLESSSASPESASPQSTVTVFQQTQIQEPTANATTTTATTDELKTVTKDRMEDIK
ILIASPSPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALS
QRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGTLLQQPDDHAATTSLSWKRVK
GCKSSEQNGMEQKTIILIPSDLACRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGE
ELLRALDQVN
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaatgtcggagtttgggagacaaatttgtctttttaaaagaaggtctagga
aactcaaaacctgaagaattggaagagatcagaatagaaaatggtaggataagttctgaa
cgtcgaaaagaaaagtctcgagatgcagccagatctcggcgaagtaaagaatctgaagtc
ttttatgagcttgctcatcagttgccacttccacataatgtgagttcgcatcttgataag
gcctctgttatgaggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggt
gatttggatattgaagatgaaatgaaagcacagatgaattgcttttatttgaaagccttg
gatggttttgttatggttctcacagatgatggtgacatgatttacatttctgataatgtg
aacaaatacatgggattaactcagtttgaactaactggacacagtgtgtttgattttact
catccatgtgaccatgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaa
aagggtagagaacaaaacacacagcgaagcttttttctcagaatgaagtgtaccctaact
agccgaggaagaactatgaacataaagtctgcaacatggaaggtattgcactgcacaggc
catattcacgtatatgataccaacagtaaccaacctcagtgtgggtataagaaaccacct
atgacctgcttggtgctgatttgtgaacccattcctcacccatcaaatattgaaattcct
ttagatagcaagactttcctcagtcgacacagcctggatatgaaattttcttattgtgac
gaaagaattaccgaattgatgggatatgagccagaagaacttttaggccgctcaatttat
gaatattatcatgctttggactctgatcatctgaccaaaactcatcatgatatgtttact
aaaggacaagtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgg
gttgaaactcaagcaactgtcatatataacaccaagaactctcaaccacagtgcattgta
tgtgtgaattatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaa
acagaatgtgtccttaaaccggttgaatcttcagatatgaaaatgactcagctattcacc
aaagttgaatcagaagatacaagtagcctctttgacaaacttaagaaggaacctgatgct
ttaactttgctggccccagccgccggagacacaatcatatctttagattttggcagcaac
gacacagaaactgatgaccagcaacttgaggaagtaccattgtataatgatgtaatgctc
ccctcacccaacgaaaaattacagaatataaatttggcaatgtctccattacccacctct
gaaacaccaaagccgcttcgaagtagtgctgaccctgcactcaatcaagaagttgcatta
aaattagaaccaaatccagagtcactggaactttcttttaccatgccccagattcaggat
cagccacctagtccttctgatggaagcactagacaaagttcacctgagcctaatagtccc
agtgaatattgtttttatgtggatagtgatatggtcaatgaattcaagttggaattggta
gaaaaactttttgctgaagacacagaagcaaagaacccattttccactcaggacacagat
ttagacttggagatgttagctccctatatcccaatggatgatgacttccagttacgttcc
ttcgatcagttgtcaccattagaaagcagttccgcaagccctgaaagcgcaagtcctcaa
agcacagttacagtattccagcagactcaaatacaagaacctactgctaatgccaccact
accactgccaccactgatgaattaaaaacagtgacaaaagaccgtatggaagacattaag
atattgattgcatctccatctcctacccacatacataaagaaactaccagtgccacgtca
tcaccatatagagatactcaaagtcggacagcctcaccaaacagagcaggaaaaggagtc
atagaacagacagaaaaatctcatccaagaagccctaacgtgttatctgtcgctttgagt
caaagaactacagttcctgaggaagaactaaatccaaagatactagctttgcagaatgct
cagagaaagcgaaaaatggaacatgatggttcactttttcaagcagtaggaattggaaca
ttattacagcagccagacgatcatgcagctactacatcactttcttggaaacgtgtaaaa
ggatgcaaatctagtgaacagaatggaatggagcaaaagacaattattttaataccctct
gatttagcatgtagactgctggggcaatcaatggatgaaagtggattaccacagctgacc
agttatgattgtgaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaa
gaattactcagagctttggatcaagttaactga
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