Symphalangus syndactylus (siamang): 129488168
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Entry
129488168 CDS
T10134
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129488168 (PMS1)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129488168 (PMS1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HIRA_B
Motif
Other DBs
NCBI-GeneID:
129488168
NCBI-ProteinID:
XP_055145963
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All DBs
Position
8:93886909..93983193
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AA seq
930 aa
AA seq
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MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYG
ILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL
PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRFYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSTADIVL
SKTAETDVLFNKMESSGKNYSNVDTSVIPFQNDMHNDESGKNADDCLKHQISVGDFGYGH
CSSEISNIDKNTKNAFQDISMSNVSQENTQTEYSKTCFMGSVKHTQSENGNKDHIDESGE
NEEEAGLENSLEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPSPEQTN
LNEDPCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENPKTSLED
ATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQILKDGKKKIKPTSAWN
LAQKHKLKTSLSNQPKLDELLQSQTEKRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKD
EPCLIHSLRFPDAWLMTSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESL
FNGSHYLDVLCKMTADDQRYSGSTYLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCL
PFYGVADLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIY
RMKHQFGNEIKECVHGRPFFHHLTYLPETT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattgcctgcggcaacagttcgactcctttcaagttctcagatcatcacttcg
gtggtcagtgttgtaaaagagcttattgaaaactccttggatgctggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaggtgcgagataacggggagggt
atcaaggctgttgatgcacctgtaatggcaatgaagtactacacctcaaaaataaatagt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagccttggggtcaatt
tgttgtgtagctgaggttttaattacaacaagaacggctgctgataattttagcacccag
tatgttttagatggcagtggccacatactttctcagaaaccttcacatcttggtcaaggt
acaactgtaactgctttaagattatttaagaatctacctgtaagaaagcagttttactca
actgcaaaaaaatgtaaagatgaaataaaaaagatccaagatctcctcatgagctatggt
atccttaaacctgacttaaggattgtttttgtacataataaggcagttatttggcagaaa
agcagagtatcagatcacaagatggctctcatgtcagttctggggactgctgttatgaac
aatatggaatcctttcagtaccactctgaagaatctcagatttatctcagtggatttctt
ccaaagtgtgatgcagaccactctttcactagtctttcaacaccagaaagaagtttcatc
ttcataaacagtcgaccagtacatcaaaaagatatcttaaagttaatccgacatcattac
aatctgaaatgcctaaaggaatctactcgtttctatcctattttctttctgaaaatcgat
gttcctacagctgatgttgatgtcaatttaacaccagataaaagtcaagtattattacaa
aataaggaatctgttttaattgctcttgaaaatctgatgacgacttgttatggaccatta
cctagtacaaattcttatgaaaataataaaacagatgtttccacagctgacattgttctt
agtaaaacagcagaaacagatgtgctttttaataaaatggaatcatctggaaagaattat
tcaaatgttgatacttcagtcattccattccaaaatgatatgcataatgatgaatctgga
aagaacgctgatgattgtttaaagcaccagataagtgttggtgactttggttatggtcat
tgtagtagtgaaatttctaacattgataaaaacactaagaatgcatttcaagacatttca
atgagtaatgtatcacaggagaacactcagacggaatatagtaaaacttgttttatgggt
tccgttaagcatacccagtcagaaaatggcaataaagaccatatagatgagagtggggaa
aatgaggaagaagcaggtcttgaaaactctttggaaatttctgcagatgagtggagcagg
ggaaatatacttaaaaattcagtgggagagaatattgaacctgtgaaaattttagtgcct
gaaaaaagtttaccatgtaaagtaagtaataataattatccaagccctgaacaaacgaat
cttaatgaagatccatgtaacaaaaaatcaaatgtaatagataataaatctggaaaagtt
acagcttatgatttacttagcaatcgagtaatcaagaaacccatgtcagcaagtgctctt
tttgttcaagatcatcgtcctcagtttctcatagaaaatcctaagactagtttagaggat
gcaacactacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaatat
gaagagaaggctactaaagacttggaacgatacaatagtcaaatgaagagagccattgaa
caggagtcacaaatattaaaagatggcaaaaaaaagataaaacccaccagcgcatggaat
ttggcccagaagcacaagttgaaaacctcattatctaatcaaccaaaacttgatgaactc
cttcagtcccaaactgaaaaaaggagtcaaaatattaaaatggtacagatccccttttct
atgaaaaacttaaaaataaattttaagaaacaaaacaaagttgacttagaagagaaggat
gaaccttgcttgatccacagtctcaggtttcctgatgcatggctaatgacatccaaaaca
gaggtaatgttattaaatccatatagagtagaagaagccctgctatttaaaagacttctt
gagaatcataaacttcctgcagagccactggaaaagccaattatgttaacagagagtctt
tttaatggatctcattatttagacgttttatgtaaaatgacagcagatgaccaaagatac
agtggatcaacttacctgtctgatcctcgtcttacagcgaatggtttcaagataaaattg
ataccaggagtttcaattactgaaaattacttggaaatagaaggaatggctaattgtctc
ccattctatggagtagcagatttaaaagaaattcttaatgctatattaaacaaaaatgca
aaggaagtttatgaatgtagacctcgcaaagtgataagttatttagagggagaagcagtg
cgtctgtctagacaattacccatgtacttatcaaaagaggacatccaagacattatctac
agaatgaagcaccagtttggaaatgaaattaaagagtgtgttcatggtcgcccatttttt
catcatttaacctatcttccagaaactacatga
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