Symphalangus syndactylus (siamang): 129488392
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Entry
129488392 CDS
T10134
Symbol
FN1
Name
(RefSeq) fibronectin isoform X2
KO
K05717
fibronectin 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04151
PI3K-Akt signaling pathway
ssyn04510
Focal adhesion
ssyn04512
ECM-receptor interaction
ssyn04518
Integrin signaling
ssyn04810
Regulation of actin cytoskeleton
ssyn04820
Cytoskeleton in muscle cells
ssyn04933
AGE-RAGE signaling pathway in diabetic complications
ssyn05100
Bacterial invasion of epithelial cells
ssyn05135
Yersinia infection
ssyn05146
Amoebiasis
ssyn05165
Human papillomavirus infection
ssyn05200
Pathways in cancer
ssyn05205
Proteoglycans in cancer
ssyn05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129488392 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129488392 (FN1)
04518 Integrin signaling
129488392 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129488392 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129488392 (FN1)
04810 Regulation of actin cytoskeleton
129488392 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129488392 (FN1)
05205 Proteoglycans in cancer
129488392 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
129488392 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129488392 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
129488392 (FN1)
05100 Bacterial invasion of epithelial cells
129488392 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
129488392 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129488392 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129488392 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyn04147
]
129488392 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
ssyn00536
]
129488392 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
ssyn04990
]
129488392 (FN1)
Membrane trafficking [BR:
ssyn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
129488392 (FN1)
Exosome [BR:
ssyn04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
129488392 (FN1)
Glycosaminoglycan binding proteins [BR:
ssyn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129488392 (FN1)
Domain-containing proteins not elsewhere classified [BR:
ssyn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
129488392 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_VIN3
Fn3_Dep-1_3rd
NDNF
DUF8447
FN3_Tor_3rd
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
129488392
NCBI-ProteinID:
XP_055146502
LinkDB
All DBs
Position
8:complement(119930682..120005560)
Genome browser
AA seq
2446 aa
AA seq
DB search
MLRGPGPGLLLLAVLYLGTAVPSTGASKSKRQAQQMVQPQAPVAVSQSKPGCYDNGKHYQ
INQQWERTYLGNALVCTCYGGSRGFNCESKPEAEETCFDKYTGNTYRVGDTYERPKDSMI
WDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCK
PIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSY
RIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSVQTTSSGSGPFTDVHAAVYQPQPHP
QPPPYGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALC
HFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPVDQCQDSETGTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQ
PLQTYPSSSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNPVGRWKEATIP
GHLNSYTIKGLKPGVVYEGQLISIQQYGHREVTRFDFTTTSTSTPVTSNTVTGETTPFSP
YVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDL
LPGRKYIVNVYQISEDGEQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPITG
YRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTG
TPRSDTVPSPRDLQFVEVTDVKVTIMWTPPQSAVTGYRVDVIPVNLPGEHGQRLPISRNT
FAEVTGLSPGVTYYFKVFAVNHGRESKPLTAQQTTKLDAPTNLQFVNETDTTVLVRWTPP
RAQITGYRLTIGLTRRGQPRQYNVGPSVSKYPLRNLQPGSEYTVSLVAIKGNQESPKATG
VFTTLQPGSSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVV
SGLTPGVEYVYTIQVLRDGQERDAPIVNKVVTPLSPPTNLHLEANPDTGVLTVSWERSTT
PDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPIS
DTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSV
GYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAP
PPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP
LRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHVSGRPREDRVPPS
RNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWD
APAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPA
SSKPISINYRTEIDKPSQMQVTDVQDNSISVKWLPSSSPVTGYRVTTTPKNGPGPTKTKT
AGPDQTEMTIEGLQPTVEYVVSVYAQNPSGESQPLVQTAVTNIDRPKGLAFTDVDVDSIK
IAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDM
ESQPLIGTQSTAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEIN
LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETT
ITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDN
ARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVP
RPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPE
ILDVPSTVQKTPVITHPGYDTGNGIQLPGTSGQQPSVGQQMIFEEHGFRRTTPPTTATPI
RHRPRPYPPNVGQEALSQTTISWAPFQDTSEYIISCHPVGTDEEPLQFRVPGTSTSATLT
GLTRGATYNIIVEALKDQQRHKVREEVVTVGNSVNEGLNQPTDDSCFDPYTVSHYAVGDE
WERMSESGFKLLCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLG
NGKGEFKCDPHEATCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQRGWRCDNCRRPGGEP
SPEGTTGQSYNQYTQRYHQRTNTNVNCPIECFMPLDVQADREDSRE
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggtccggggcccgggctgctgctgctggccgtcctgtacctggggacagcg
gtgccctccacgggagcctcgaagagcaagaggcaggctcagcaaatggttcagccccag
gccccggtggctgtcagtcaaagcaagcccggttgttatgacaatggaaaacattatcag
ataaatcaacagtgggagcggacctacctgggcaatgccttggtttgtacttgttacgga
ggaagccgaggttttaactgcgagagtaaacctgaagctgaagagacttgctttgacaag
tacactggaaacacttaccgagtgggtgacacttatgagcgtcctaaagactccatgatc
tgggactgtacctgcatcggggctgggcgagggagaataagctgtaccatcgcaaaccgc
tgccatgaagggggtcagtcctacaagattggtgacacctggaggagaccacatgaaact
ggtggttacatgttagagtgtgtgtgtcttggtaatggaaaaggagaatggacctgcaag
cccatagctgagaagtgttttgatcatgctgctgggacttcctatgtggtcggagaaacc
tgggagaagccctaccaaggctggatgatggtggattgtacttgcctgggagaaggcagc
ggacgcatcacttgcacctctagaaatagatgtaacgatcaggacacaaggacgtcctat
agaattggagacacctggagcaagaaggataatcgaggaaacctgctccagtgcatctgc
acaggcaacggccgaggagagtggaagtgtgagaggcacacctctgtgcagaccacatcg
agcggatctggccccttcaccgatgttcatgcagctgtttaccaaccgcagcctcacccc
cagcctcctccctatggccactgtgtcacagacagtggtgtggtctactctgtggggatg
cagtggctgaagacacaaggaaataagcaaatgctttgcacgtgcctgggcaacggagtc
agctgccaagagacagctgtaacccagacttatggtggcaactcaaatggagagccatgt
gtcttaccattcacctacaatggcaggacgttctactcctgcaccacagaagggcgacag
gacggacatctttggtgcagcacaacttcgaattatgagcaggaccagaaatattctttc
tgcacggaccacactgttttggttcagactcgaggaggaaattccaatggtgccttgtgt
cacttccccttcctatacaacaaccacaattacactgattgcacttctgagggcagaaga
gacaacatgaagtggtgtgggaccacacagaactatgatgccgaccagaagtttgggttc
tgccccatggctgcccatgaggaaatctgcacaaccaatgaaggggtcatgtaccgcatt
ggagatcagtgggataagcagcatgacatgggtcacatgatgaggtgcacatgtgttggg
aatggtcgtggggaatggacgtgcattgcctactcacagcttcgagatcagtgcattgtt
gatgacatcacttacaatgtgaatgacacattccacaagcgtcatgaagaggggcacatg
ctgaactgtacatgcttcggtcagggtcggggcagatggaagtgtgatcctgtcgaccaa
tgccaggattcagagactgggacgttttatcaaattggagattcatgggagaagtatgtg
catggtgtcagataccagtgctactgctatggccgtggcattggggagtggcattgccaa
cctttacagacctatccaagctcaagtggtcctgtcgaagtatttatcactgagactccg
agtcagcccaactcccaccccatccagtggaatgcaccacagccatctcacatttccaag
tacattctcaggtggagacctaaaaatcctgtaggccgttggaaggaagctaccatacca
ggccacttaaactcctacaccatcaaaggcctgaagcctggtgtggtatacgagggccag
ctcatcagcatccagcagtacggccaccgagaagtgactcgctttgacttcaccaccacc
agcaccagcacacctgtgaccagcaacaccgtgacaggagagacaactcccttttctccc
tatgtggccacttctgaatctgtgaccgaaatcacagccagcagctttgtggtctcctgg
gtctcagcttccgacaccgtgtcaggattccgggtggaatatgagctgagtgaggaggga
gatgagccacagtacctggatcttccaagcacagccacttccgtgaacatccctgacctg
cttcctggccgaaaatacattgtaaatgtctatcagatatctgaggatggggagcagagt
ctgatcctgtctacttcacaaacaacagcgcccgatgcccctcctgacccgactgtggac
caagttgatgacacctcaattgttgttcgctggagcagaccccaggctcccatcacaggg
tacagaatagtctattcaccatcagtagaaggtagcagcacagaactcaaccttcctgaa
actgcaaactccgtcaccctcagtgacttgcaacctggtgttcagtataacatcactatc
tatgctgtggaagaaaatcaagaaagtacacctgttgtcattcaacaagaaaccactggc
accccacgttcagatacagtgccctctcccagggacttgcagtttgtggaagtgacagac
gtgaaggtcaccatcatgtggacaccgcctcagagtgcagtgaccggctaccgcgtggat
gtgatccccgtcaacctgcctggcgagcacgggcagaggctgcccatcagcaggaacacc
tttgcagaagtcaccgggctgtcccctggggtcacctattacttcaaagtctttgcagtg
aaccatggaagggagagcaagcctctgactgctcaacagacaaccaaactggatgctccc
actaacctccagtttgtcaatgaaactgatactactgtcctggtgagatggactccacct
cgggcccagataacaggataccgactgaccataggcctgacccgaagaggccagcccagg
cagtacaatgtgggtccctctgtctccaagtacccactgaggaatctgcagcctggatct
gagtacaccgtatccctcgtggccataaagggcaaccaagagagccccaaagccactgga
gtctttaccacattgcagcctgggagctctattccaccttacaacaccgaggtgactgag
accaccattgtgatcacatggacgcctgctccaagaattggttttaagctgggtgtacga
ccaagccagggaggagaggcaccacgagaagtgacttcggactcaggaagcatcgttgtg
tctggcttgactccaggagtggaatatgtctacaccatccaagtcctgagagacggacag
gaaagagatgcgccaatcgtaaacaaagtggtaacaccattgtctccaccaacaaacttg
catctggaggcaaaccctgacactggagtgctcacagtctcctgggagaggagcaccacc
ccagacattactggttatagaattaccacaacccctacaaacggccagcagggatattct
ttggaagaagtggtccatgctgatcagagctcctgcacttttgataacctgagtcccggc
ctggagtacaatgtcagtgtttacactgtcaaggatgacaaggaaagtgtccctatctct
gataccatcatcccagaggtgccccaactcactgacctaagctttgttgatataaccgat
tcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgcatc
acagtagttgcggcaggagaaggtatccctatttttgaagattttgtggactcctcagta
ggatactacacagtcacagggctggagccgggcattgactatgatatcagcgttatcact
ctcattaatggcggcgagagtgcccctactacactgacacaacaaacggccgttcctcct
cccactgacctgcgattcaccaacattggtccagacaccatgcgtgtcacctgggctcca
cccccatccattgatttgaccaacttcctggtgcgttactcacctgtgaaaaatgaggaa
gatgttgcagagttgtcaatttctccttcagacaatgcagtggtcttaacaaatctcctg
cctggtacagaatatgtagtgagtgtctccagtgtctatgaacaacacgagagcacacct
cttagaggaagacagaaaacaggtcttgattccccaactggcattgacttttctgatatt
actgccaactcttttactgtgcactggattgctcctcgagccaccatcactggttacagg
atccgccatcatcctgagcacgttagtgggagacctcgagaagatcgggtgcctccctct
cggaattccatcactctcaccaacctcactccgggcacagagtatgtggtcagcatcgtt
gctcttaatggcagagaggaaagtcccttattgattggccaacaatcaacagtttctgac
gttccgagggacctggaagttgttgctgcgacccccaccagcctactgatcagttgggat
gctcctgctgtcacagtgagatattacaggatcacttatggagaaacaggaggaaatagc
cctgtccaggagttcactgtgcctgggagcaagtctacagctaccatcagtggccttaaa
cctggagttgattataccatcactgtgtatgctgtcactggccgtggagacagccccgcg
agcagcaagccaatttccattaattaccgaacagaaattgacaaaccatcccagatgcaa
gtgaccgatgttcaggacaacagcattagtgtcaagtggctgccttcaagttcccctgtt
actggttacagagtaaccaccactcccaaaaatggaccaggaccaacaaaaactaaaact
gcaggtccagatcaaacagaaatgactattgaaggcttgcagcccacagtggagtatgtg
gttagtgtctatgctcagaatccaagcggagagagtcagcctctggttcagactgcagta
accaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatcaaa
attgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgagccct
gaggatggaatccatgagctattccctgcacctgatggtgaagaagacactgcagagctg
caaggcctcagaccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatg
gagagccagcccctgattggaacccagtccacagctattcctgcaccaacggacctgaag
ttcactcaggtcacacccacgagcctgagcgcccagtggacaccacccaatgttcagctc
actggatatcgagtgcgggtgacccccaaggagaagaccggaccaatgaaagaaatcaac
cttgctcctgacagctcatctgtggttgtatcaggacttatggtggccaccaaatatgaa
gtgagtgtctatgctcttaaggacactttgacaagcagaccagctcagggagttgtcacc
actctggagaatgtcagcccaccaagaagggctcgtgtgacagatgctactgagaccacc
atcaccattagctggagaaccaagaccgagacaatcactggcttccaagttgatgctgtt
ccagccaatggccagactccaatccagagaaccatcaagccagatgtcagaagctatacc
atcacaggtttacaaccaggcactgactacaagatctacttgtacaccttgaacgacaac
gcccggagctcccctgtggtcatcgacgcctccactgccattgacgcaccatccaacctg
cgtttcctggccaccacacccaattccttgctggtatcatggcagccgccacgtgccagg
attaccggctacatcatcaagtatgagaagcctgggtctcctcccagagaagtggtccct
cggccccgccctggtgtcacagaggctactattactggcctggaaccgggaaccgaatat
acaatttatgtcattgccctgaagaataatcagaagagcgagcccctaattggaaggaaa
aagacagacgagcttccccaactggtaacccttccacaccccaatcttcatggaccagag
atcttggatgttccttccacagttcaaaagacccctgtcatcacccaccctgggtatgac
actggaaatggtattcagcttcctggcacttctggtcagcaacccagtgttgggcaacaa
atgatctttgaggaacatggttttaggcggaccacaccgcccacaacggccacccccata
aggcataggccaagaccatacccgccgaatgtaggacaagaagctctctctcagacaacc
atctcatgggccccattccaggacacttctgagtacatcatttcatgtcatcctgttggc
actgatgaagaacccttacagttcagggttcctggaacttctaccagtgccactctgaca
ggcctcaccagaggtgccacctacaacatcatagtggaggcactgaaagaccagcagagg
cataaggttcgggaagaggttgttaccgtgggcaactctgtcaatgaaggcttgaaccaa
cctacagatgactcgtgctttgacccctacacagtttcccattatgccgttggagatgag
tgggaacgaatgtctgaatcaggctttaaactgttgtgccagtgcttaggctttggaagt
ggtcatttcagatgtgattcatctaaatggtgccatgacaatggtgtgaactacaagatt
ggagagaagtgggaccgtcagggagaaaatggccagatgatgagctgcacctgtcttggg
aatggaaaaggagaattcaagtgtgaccctcatgaggcaacgtgttatgatgatgggaag
acgtaccacgtaggagaacagtggcagaaggaatatctcggtgccatttgctcctgcaca
tgctttggaggccagcggggctggcgctgtgacaactgccgcagacctgggggcgaaccc
agtcccgaaggcactactggccagtcctacaaccagtatactcagagataccatcagaga
acaaacactaatgttaattgcccaattgagtgcttcatgcctttagatgtacaggctgac
agagaagattcccgagagtaa
DBGET
integrated database retrieval system
