Symphalangus syndactylus (siamang): 129488685
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Entry
129488685 CDS
T10134
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04136
Autophagy - other
ssyn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129488685 (ATG4B)
04136 Autophagy - other
129488685 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssyn01002
]
129488685 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129488685 (ATG4B)
03029 Mitochondrial biogenesis [BR:
ssyn03029
]
129488685 (ATG4B)
Peptidases and inhibitors [BR:
ssyn01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129488685 (ATG4B)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129488685 (ATG4B)
Mitochondrial biogenesis [BR:
ssyn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129488685 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
129488685
NCBI-ProteinID:
XP_055147238
LinkDB
All DBs
Position
8:146104092..146139785
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AA seq
481 aa
AA seq
DB search
MARSVPSDSRASRRPATRPHAARRAPRGSRRPGRTPKWRLPRISARAPYCFRRLRRRSDW
PPRHPVAASRCGPVGATPLGSVGGRTGKMDAATLTYDTLRFAEFEDFPETSEPVWILGRK
YSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHL
GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL
KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEV
TNRLSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGE
ELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDW
CQQVKKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILS
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagtgtcccgtcggacagcagagcgagccgtcgtcccgcgacacgacctcac
gctgcccgcagggcgccccggggctcgcgtcggcccggccgtacgccaaaatggcggctc
ccacgtatttccgctcgcgcgccgtattgttttcgccgcctgcgccggcgctccgattgg
cccccgcggcatcccgtcgccgcgtcgcgttgcgggccagtcggagcgacgccgctcggg
tcagtcggcggccggactgggaagatggacgcagctactctgacctacgacactctccgg
tttgccgagtttgaagattttcctgagacctcagagcccgtttggatactgggtagaaaa
tacagcattttcacagaaaaggacgagatcttgtctgatgtggcatctagactttggttt
acatacaggaaaaactttccagccattggggggacaggccccacctcggacacaggctgg
ggctgcatgctgcggtgtggacagatgatctttgcccaagccctggtgtgccggcaccta
ggccgagattggaggtggacacaaaggaagaggcagccagacagctacttcagcgtcctc
aacgcattcatcgacaggaaggacagttactactctattcaccagatagcgcaaatggga
gttggcgaaggcaagtccataggccagtggtacgggccgaacactgtcgcccaggtcctc
aagaagcttgctgtcttcgacacgtggagctccttggcggtccacattgcaatggacaac
actgtggtgatggaggaaatcagaaggttgtgcaggaccagtgttccctgtgcaggcgcc
actgcgtttcctgcagattccgaccggcactgcaacggattccctgccggagctgaggtc
accaacaggctgtcgccatggagacccctggtacttctcattcccctgcgcctggggctc
acggacatcaacgaggcctatgtggagacgctgaagcactgcttcatgatgccccagtcc
ctgggcgtcatcggagggaagcccaacagcgcccactacttcatcggctacgttggtgag
gagctcatctacctggacccccacaccacgcagccagccgtggagcccactgacggctgc
ttcatcccggacgagagcttccactgccagcacccgccgtgccgcatgagcatcgcagag
cttgacccgtccatcgctgtggggtttttctgtaagactgaagatgacttcaacgactgg
tgccagcaagtcaaaaagctgtctctgctcggaggcgccctgcccatgtttgagctggtg
gagcagcagccttcacacctggcctgccccgacgtcctgaacctgtccctagattcttct
gatgtagagcgactggaaagattcttcgactcagaagatgaagactttgaaatcctgtcc
ctttga
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