Symphalangus syndactylus (siamang): 129489343
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Entry
129489343 CDS
T10134
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03013
Nucleocytoplasmic transport
ssyn03015
mRNA surveillance pathway
ssyn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129489343 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
129489343 (ACIN1)
03015 mRNA surveillance pathway
129489343 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129489343 (ACIN1)
03041 Spliceosome [BR:
ssyn03041
]
129489343 (ACIN1)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129489343 (ACIN1)
Spliceosome [BR:
ssyn03041
]
Complex C
Other components
EJC/TREX
129489343 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
129489343
NCBI-ProteinID:
XP_055147766
LinkDB
All DBs
Position
9:31020287..31057396
Genome browser
AA seq
1343 aa
AA seq
DB search
MWRRKHPRTSGGTRGVLSGNRGVEYGSGRGHLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSVSEEKGDSDDEKPRKGERRSSRVRQARAAKLS
EGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEDDDEGQKSREAPI
LKEFKEEGEEMPRVKPEEMMDERPKTRSQEQEVLERGGRVTRSQEEARKSHLARQQQEKE
MKTTSPLEEEEREIKSSQSLKEKSKSPSPPRLTEDLKKASLVVQPEQTANEEETPPPLLT
KEASSPPPHTQLHSEEEIEPMEGPAPPVLIQLSPPNTVAETRELLVSQHTVQLVGGLSPL
SSPSDTKAESPAEKVPEESILPLVQKSTLADYSAQKDLEPESDKSAQPLPLKIEELALAK
GITEECLKQPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSG
SRSHSPLRSKQRDVAQARTHANPRGRPQMGSRSTSESRSRSRSRSRSRSASSNSRKSLSP
GVSRDSSTSYTETKDPSSGQEVATPPVPQLQVCEPKERTSTSSCSVPARRLSQPGPAEKH
VTQRFQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESERIHHTVEEKEEVTMDTSE
NRPENDVPEPPMPIADQVSNDDRPEGSVEDEEKKESSLPKSFKRKISVVSATKGVPAGNS
DTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRIS
EDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQVSVEV
ALPPPAEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISN
LVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSN
PKFLCADYAEQDELDYHRGLLVDRPSETKTEEQGIPRPLHPPPPPPVQPPQHPRAEQREQ
ERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEK
KEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEE
EQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDR
RDTKRHSRSRSRSTPVRDRGGRR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacatccgaggacatccggaggaacccggggagttctgagtggtaat
cgaggggtagagtatggcagtgggcggggtcatctcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagtttcataaaacagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgggaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgcccagaaaaagctcctcagtttctgaagagaaaggtgactctgatgatgagaaa
ccaaggaaaggagaaagacgatcatctagggtcagacaggcaagagcagctaaactctct
gagggcagccagcctgctgaggaggaagaggatcaagaaacaccttccagaaacctaagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaggaggaggaggaggaggaa
gaagatgatgaagaagaggaagatgatgatgagggacaaaaatctagggaggcaccaatc
ctgaaagagtttaaggaagaaggggaagagatgcctagagtaaaaccagaggagatgatg
gatgagagacccaaaacaagatcccaggaacaggaggtgttagagagaggaggcagagtt
acaagatcccaggaagaggctagaaaaagtcatctggccagacagcagcaggagaaggaa
atgaaaacaacatctccccttgaggaggaagaaagagaaataaaatcttcacaaagctta
aaggaaaaatcgaagtctccttcccctcctcgactgactgaagatctaaagaaggcctca
cttgtagtgcagccagagcaaactgccaacgaggaggagactcctccacctttacttacg
aaggaagcatcttctccaccacctcatacacaactccatagtgaagaagaaatagagccc
atggaaggcccagccccccctgtcctcattcagttatctcctcctaatacagttgctgag
accagggagctattagtatctcagcatactgtccagttggtaggaggcctgtctcctttg
tcaagtccttcagacaccaaagcagaatctccagcagagaaagtgccagaggaaagtata
ctgcctctggttcagaaaagcacactggctgactactcagcccagaaggatcttgaacct
gagtcagacaaatctgctcagcccctccctctaaaaattgaggaattagcactggccaaa
ggaatcactgaagaatgtctgaaacagccatctttggaacagaaggaaggcagaagagct
tctcatacccttcttccaagccacagattgaaacagtcagctgattcatcctctagccgg
tcctcctcatcttcctcctccagttctagatcaagatctcgctctcctgacagttcaggt
tctcggtctcattcaccgctcagatccaagcagagagatgtagcccaggcacgtactcat
gccaaccctcgtggtagaccccagatgggctccagatcaacatcagagtccagatcaagg
tcacgttcacgttcacgttctcgttcagcatcaagcaacagcagaaaatctctgagccct
ggagtctccagggacagcagcaccagctatactgaaaccaaagatccctcttctggtcag
gaggttgcaactccaccagtgccacaactgcaggtctgtgagccaaaggagaggacttcc
acctcctcatgctctgtcccagcaaggcgtctgagtcagcctggaccagctgaaaagcat
gtgacccagaggttccagcctgagcgggggagcccaaagaagtgtgaagctgaagaggca
gagccaccagctgccacacagccccaaacctcagagactcagacctctcatctgccagaa
tcagaaagaattcatcacactgttgaggagaaggaggaagtgaccatggacacaagtgaa
aacagacctgaaaatgatgttccagaacctcctatgcctattgcagaccaagtcagcaat
gatgaccgcccggagggcagtgttgaagatgaggagaagaaagagagctcgctgcccaaa
tcattcaagaggaagatctccgttgtctcagctaccaagggggtgccagctggaaacagt
gacacagaggggggccagcctggtcggaaacgacgctggggagccagcacagccaccaca
cagaagaaaccttccatcagtatcaccactgaatcactaaagagcctcatccccgacatc
aaacccctggcggggcaggaggctgttgtggatcttcatgctgatgactctcgcatctct
gaggatgagacagagcgtaatggcgatgatgggacccatgacaaggggctgaaaatatgc
cggacagtcactcaggtagtacctgcagagggtcaggagaatgggcagagggaagaagag
gaagaagagaaggaacctgaagcagaacctcctgtacctccccaggtgtcagtagaggtg
gccttgcccccacctgcagagcatgaagtaaagaaagtgactttaggagataccttaact
cgacgttccattagccagcagaagtccggagtttccattacaattgatgacccagtccga
actgcccaggtgccctccccaccccggggcaagattagcaacattgtccatatctccaat
ttggtccgtcctttcactttaggccagctaaaggagttgttggggcgcacaggaaccttg
gtggaagaggccttctggattgacaagatcaaatctcattgctttgtaacgtactcaaca
gtagaggaagctgttgccacccgcacagctctgcatggggtcaaatggccccagtccaat
cccaaattcctttgtgctgactatgccgagcaagatgagctggattatcaccgaggcctc
ttggtggaccgtccctctgaaactaagacagaggagcaggggataccacggcccctgcac
cccccacccccacccccagtccagccaccacagcaccccagggcagagcagcgggagcag
gaacgagcagtgcgggaacagtgggcagaacgggaacgggaaatggagcggcgggagcgg
actcgatcagagcgtgaatgggatcgggacaaagttcgagaagggccccgttcccgatca
aggtcccgtgaccgccgccgcaaggaacgtgcgaagtctaaagaaaagaagagtgagaag
aaagagaaagcccaggaggaaccacctgccaagctgttggatgaccttttccgaaagacc
aaggcagctccctgcatctattggctcccactgactgacagccagatcgttcagaaggag
gcggagcgggccgaacgggccaaggagcgggagaagcggcgaaaggagcaagaagaagaa
gagcaaaaggagcgggagaaggaagccgagcgggaacggaaccgacagctggagcgagag
aaacgtcgggagcacagtcgggagagggacagggagagagagagagaaagggagcgggac
aggggggaccgagatcgggatagggaaagggaccgagaacggggcagggaaagggatcgc
agggacaccaagcgccacagcagaagccggagtcggagcacacctgtgcgggaccggggt
gggcgccgctag
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