Symphalangus syndactylus (siamang): 129489487
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Entry
129489487 CDS
T10134
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129489487 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyn03032
]
129489487 (RIF1)
DNA replication proteins [BR:
ssyn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129489487 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
GNC1_N
Motif
Other DBs
NCBI-GeneID:
129489487
NCBI-ProteinID:
XP_063502106
LinkDB
All DBs
Position
9:complement(49928338..50090416)
Genome browser
AA seq
2470 aa
AA seq
DB search
MTARGQSPLAPLLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVL
KTHMSSQNSELSSAALQALGFCLYNSKITSELSEANALELLSKLNDTIKSSDKNVRTRAL
WVISKQTFPSEVVGKMVSSIIDSLEVLFNKGETHSAVVDFEALNVIIRLIEQAPIQMGEE
AVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGRTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTPVHKGASSPYGAPGTPRMNLSSNLGG
MATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEYPLISSPSFFSKHANTVIT
AVHDSFVAVGKDAPDVVVSAIWKELISLVKSVTESGNKKEKPGSEVLTLLLKFLESIVKS
EVFPVSKTLVLVEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNFLECGVSD
ERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVTTMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIHIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEAHSDTLFTIGNSITSIISS
VLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEIIACLQFSY
TGTYDSELLEQLSPLLCIVFLHKNKQIRKQSAQFWNATFAKVTMLVYPEELKPVLTQAKQ
KFLLLLPGLETVEMMEESSGPYSDGTENSQLNVKISGMERKSNGKRDSFLAQTKNKKENM
KPAAKLKLESSSLKVKSEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIP
AMYNNLDVSQDTLFTQDSQEEPMEIPTLSRKPKEDSKMMITEEQMDSDIVIPQDATEDCG
MDEHLEKASLSNNECGSLDKTSPEMSNSNNDDRKKALISSKKTSIECASSTENSCVVSSS
SVSNTTVAGTPPYPTSRRQTFITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTD
FLPKAKQREGTFSKSDSEKIVNGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESIEG
IVVLENNPPGLLNQTECVSDNQVHLSESAVEHDNTKLKATTMENAVLLETNTVEEKNVEI
NLESKENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENNHQK
KERRKEEEKPLQKSPLHIKDDVLPKQKLISEQTLQESLIEKGSNLHEKTLGETSANAETE
QNKKKADPENIKSEGDGTQDIVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAK
EEGSRKKRSGKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDCKVSSEEDGSIKPQICE
KQDESSTVICQDSTVTSDLLQVPDDLPNACEEKNETSKYAEYSFTSLPVPESNLRTRNAI
KRLHKRDSFDNCSLGESSKIGMSDISSLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQ
PQEKSLVGIKNTENNDVEISETKKADVQAPVSTSETSQANPCSEGQFLDEHHSMNFHLGL
KEDDTINDSLIISETKSKENTMQESLPSGIVNFREETCDMDSSEAMSLESQESPNENFKT
VGPCLGDSKNVSRESLETKEEKPEETPKMELSLENVTVEGNACKVTESNLEKAKTMELDV
GNEASFYEQERTKSGISEEAAIENKRNDDSKADTAKLNAKEVTTEEFNSDISLSDNTTPV
KLSAQTEISEQTATGELDGGNDVSDPYSSEETNTEMKNYEEMMIGEVKAETGHDGETENE
GITTKTSKPDEAETKMLTAEMDNFVCDTVEMSIEEGIIDANKTETNTECSKSEEKLDNNQ
MVMESDILQEDHHTSEKVEEPSQSLTSGTAISELIIGDNNASPQKLRELDPSLVSANDSP
SGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDIDRR
CSIVRSHSSNSSPIGKSVKTSPTAQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEMARE
SIPCPTESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIK
TLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPVFDISEKTVNGIENKSLSPDEERLASD
IIDPVALETPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLSSMANSVIKNLQSR
WRSPSHENSI
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaggggtcagagccccctcgcgcccctgttggagactttggaagacccttct
gcctcccatggagggcagactgacgcttacctgactttgaccagtcgtatgactggagaa
gaaggaaaagaagtaattacagaaattgagaaaaaacttcctcggctgtacaaagtttta
aagactcacatgtccagtcaaaactcggagctgagtagtgctgctctacaagccctgggg
ttttgcttatacaattccaaaattacctcagaattatcagaggcaaatgctctagaattg
ctttcaaaattgaatgataccattaagagttcagacaaaaatgtacgtaccagagcactt
tgggtgatatctaagcagacatttccctctgaagtggttggcaaaatggtatccagtata
attgattcattagaagtgctatttaacaaaggagagacgcattctgctgttgttgatttt
gaagcattaaatgttatcataaggctaattgaacaagccccaattcaaatgggagaagag
gcagtgaggtgggcaaaactggtcatacctttagtggttcattcagcacaaaaggtacat
ttgcggggagcaactgctctggagatgggaatgccattattgcttcagaaacagcaagaa
atagcatctattacggagcagcttatgactactaaattaatctcagaacttcagaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaactactc
ggaaggaccttgcatcgaagtgggagtttcatcaattctctgttgcaactagaagaactt
ggatttcgtagtggagcacccatgattaaaaagatagcttttattgcttggaagagttta
atagataattttgctttaaatccagatattctgtgtagtgcaaaaagactcaagttgtta
atgcagcctttgagttccatccatgtgaggacagaaactctagcattaacaaaactagaa
gtctggtggtatttactgatgagacttggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagtacaataagcattgattctaatgcctcacctcaaggcaat
tcatgtcatgtagctacatctccaggtttaaatcctatgactcctgtacacaaaggtgct
tcctccccgtatggagccccgggaactccccgaatgaacctgagttcgaatttaggtgga
atggctacaatcccttccattcaacttttgggacttgaaatgttgcttcatttcttgttg
ggtccagaagtcttgagttttgctaagcaaaataaacttgtgctgagcttagagccactg
gaatatccgttaatcagcagcccttcttttttttccaaacatgcaaatacagttatcact
gctgttcatgatagctttgttgcagttggaaaagatgcccccgatgtggttgtcagtgct
atctggaaggagctaattagcttggtgaagtcagttactgaatcaggtaacaaaaaagag
aaaccaggttctgaagttttgactctcttattaaagtttttggaaagcatagtaaagtct
gaagtatttcctgtatcaaaaacgctggtcctcgtggaaattacaattaaaggacttcct
cagaaagtgttaggttcaccagcatatcaggttgctaatatggatattcttaatggaact
ccagctttgttcttaattcagttaattttcaacaatttcttggaatgtggtgtatcagat
gaaaggttctttctcagtttggaatcacttgtaggctgtgttctttctggtccaacttca
ccactagctttcagtgactcagttttaaatgttattaatcaaaatgcaaagcagttggaa
aataaggagcatctctggaaaatgtggagtgttatagtcaccccattaactgaattgatt
aatcagaccaatgaagtaaatcaaggtgatgccttagaacataattttagtgccatctat
ggtgcattgactttaccagtaaaccacattttttcagaacagagatttccagtgaccacc
atgaagactttgcttagaacttggtcagaattatatagagcatttgctcgttgtgctgct
ttggtggcaacagcagaagagaacttgtgctgtgaggaactttcttctaagataatgtcc
agtttggaagatgaaggcttttctaatttgttgttcgtggatagaattattcatattatt
actgtaatggttgattgcattgacttctcaccatataatattaaatatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaatgagcccctagggaaattg
acttctttatttaaacttattgtgaaagtgatctattctttccacactctgagcttcaag
gaagcacattccgataccctcttcactattggcaactcaatcaccagcattatttccagt
gtacttggacatatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtatatagttgt
ctgaacaacaagttagaaaagctactgggagaaattattgcttgtctgcaattcagctac
accggaacttatgacagtgaacttcttgaacaactgtcaccactattatgcatagtattt
ctgcacaagaataaacagattcgaaaacagagtgctcagttctggaatgccacttttgct
aaagtgacgatgttggtttatcctgaagagttaaaaccagtactaacacaagccaaacaa
aaatttctgctcctgttgcctggtttggaaactgttgaaatgatggaggaatccagtgga
ccatattctgatggaacagaaaattcacaactaaatgtgaagataagtggcatggagaga
aaatcaaatggaaaaagagattcatttttggcacaaacaaagaataaaaaagaaaatatg
aaaccagcagccaaactgaaacttgaatcttcatctttaaaagtaaagagtgaaattctt
ttggaagaggaaaagtctactgactttgtgtttatacctccagaaggaaaagatgcaaag
gaaagaatattaactgatcatcaaaaagaagttctcaaaacaaagcggtgtgatattcct
gccatgtataataatctggatgtttctcaagataccttatttactcaggatagtcaggaa
gagcctatggaaattcctactttatccagaaaaccaaaggaggattctaagatgatgatt
acggaggagcaaatggacagtgacattgtcattcctcaagatgccacggaagactgtggt
atggatgaacatcttgaaaaggcctccctttcaaataatgagtgtggttctcttgataaa
accagtccagaaatgtcgaacagtaataatgatgacagaaaaaaagctttaatttcatca
aagaaaacatcaattgaatgtgcatctagtacagaaaattcttgcgttgtcagcagtagt
tcagtttctaataccactgttgctggaactcccccataccctacaagtcggaggcaaacc
tttattactttggagaagtttgatggttcagaaaatagaccttttagtccatcccccttg
aataatatttcatcaactgttacagtgaaaaacaaccaggaaaccatgattaaaacagat
tttctaccaaaagcaaagcaaagagaagggactttttcaaaatctgattctgaaaaaata
gtgaatggaactaagagatcaagccggagagctggtaaagctgaacaaacagggaataaa
aggtctaagcccttaatgagatctgagccggagaaaaatactgaggaatctattgaaggc
attgtagtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgtcagat
aatcaggttcatctttctgaatctgcagtggagcatgacaatacaaagcttaaagcaaca
acaatggaaaatgctgtattattggaaactaatactgtagaggagaaaaatgtagaaatt
aatttggaatccaaagaaaatacacccccagtagtaatatcagcagatcaaatggtaaat
gaggatagtcaagttcagataactccaaatcagaaaacccttagacggtcttcaaggcga
cgttcagaagtagtagagtctaccactgaaagccaagataaggaaaataatcatcaaaaa
aaggaacgacgtaaggaagaagaaaaacctcttcagaagagtccattgcatataaaagat
gatgtgttacctaaacaaaaactgatttctgaacaaactctacaggagagtttaattgag
aaaggaagtaatttacatgagaagactcttggggaaactagtgctaatgcagaaactgaa
caaaataaaaaaaaggcagaccctgagaacattaagtctgagggggatggtacccaggac
attgtagataagtcctctgagaaactagtcagaggccgaacacgatatcaaacaagaaga
gcatctcagggtttgctttccagcattgaaaactcagaatctgatagttcggaggcaaaa
gaagaaggttctaggaagaagagatctggaaaatggaaaaacaaaagcaacgaaagtgtt
gacattcaagatcaagaagagaaagtggtgaaacaggaatgtataaaagctgaaaatcag
tcacatgattgtaaagtaagttctgaagaagatggaagcataaaacctcagatttgtgaa
aaacaagatgaaagtagtactgtaatatgtcaggattctacagtaacttcagatttgttg
caagttcctgatgatttaccaaatgcatgtgaggaaaaaaatgaaactagcaaatatgca
gaatattcctttacaagtctacctgtgccagaatcaaatctaaggactagaaatgccatt
aagagattacataagcgagactcttttgataattgtagtttgggagaatcttcaaaaata
gggatgtcagatatttcttcactttcagaaaaaacttttcaaacacttgaatgccaacac
aagagaagtaggagggtgaggagatctaaaggttgtgattgctgtggggaaaaatcacaa
cctcaggaaaagtcactcgtcgggataaagaatacagaaaataatgatgtagagattagt
gaaacaaaaaaggcagatgtacaagcacctgtaagcacatcagaaacttctcaagctaat
ccatgttctgaaggacaatttttagatgaacatcatagtatgaattttcatttgggtctc
aaagaggatgataccattaatgattcattaattatttctgaaaccaaatcaaaagaaaac
actatgcaagaatctcttccttctggaatagtaaactttagagaggaaacttgtgatatg
gattctagtgaagcaatgtctcttgaaagccaagagtcacctaatgaaaattttaaaact
gttggcccatgtttaggagactcgaaaaatgtttcacgggaatctttggagacaaaagaa
gaaaaaccagaagaaaccccaaaaatggaactgagtctagagaatgttactgttgaagga
aatgcatgtaaagtaacagaatccaatctagagaaagcaaaaactatggaattggatgta
ggaaatgaagctagcttctatgaacaagagagaaccaaaagtggtatttctgaagaagca
gcaatagaaaataaaagaaatgatgactctaaagcagacacagctaaactgaatgccaaa
gaagtaacaactgaggaatttaattcagatattagtctttctgataatactacacctgta
aaattgagtgctcaaactgagatttctgaacaaacagcaactggggaactagatggagga
aatgatgtatctgatccatactcatctgaagaaacgaatactgaaatgaaaaattatgaa
gaaatgatgattggcgaggtgaaggctgaaactggccatgatggtgaaacagagaatgag
ggcataactaccaaaacctcaaagcctgatgaagctgaaacaaaaatgttgactgcagaa
atggacaactttgtttgtgacacagttgaaatgagcattgaagaaggaatcattgacgct
aataaaactgaaacaaatactgagtgtagtaaatctgaagaaaaattagataacaatcaa
atggtaatggaaagtgatattttacaggaagatcaccatacttcagagaaagtggaggaa
ccatcacagtctctgacatctggaacagctatctctgaactaataataggagacaataat
gcatctcctcaaaaactaagggaacttgatccttcacttgtgtcagcaaatgacagtcct
agtggcatgcagacacgctgtgtctggtctcctttggcttctccatctacgagcatttta
aagagaggactaaaaagatcccaagaagatgaaatctcatcacctgttaataaggttcgc
cgtgtctcctttgcagatccaatataccaagcaggattggcagatgacattgatagacgg
tgctctattgttaggtcccattcttcaaatagttctcccataggaaaaagtgttaaaact
tctcctactgcacaatctaagcataataccacttcagccaaaggatttctgtccccagga
tcacgtagccctaaatttaagagctcaaagaagtgtttaatttcagaaatggccagagaa
tccataccatgcccaacagaaagtgtttacccagcattggtgaactgtgtggcaccagtt
gacatcattttacctcagattacatcaaacatgtgggcgagaggcctgggacaactcatt
agagctaagaatataaaaactattggtgatttgagtactcttacagcatctgaaataaaa
actcttcctatccgttctccaaaagtgtccaatgtaaaaaaggctctcagaatatatcat
gagcagcaggtgaagactcgtggactagaagagattccagtttttgatatttctgaaaaa
acagtaaatggaatagaaaataaatctctgtcacctgatgaagaaagacttgcctcagat
ataattgatcctgttgctttagaaactccgttatccaaaaaccttgtggcacagattagt
gctcttgctcttcagctggattcagaagatcttcataattattcaggaagccaactattt
gaaatgcacgagaaactaagtagtatggcaaactctgtaataaaaaatctacagtcacgt
tggagatcaccatcccatgaaaattctatttag
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integrated database retrieval system
