Symphalangus syndactylus (siamang): 129489550
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Entry
129489550 CDS
T10134
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssyn01002
]
129489550 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129489550 (USP42)
Enzymes [BR:
ssyn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129489550 (USP42)
Peptidases and inhibitors [BR:
ssyn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129489550 (USP42)
Ubiquitin system [BR:
ssyn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129489550 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129489550
NCBI-ProteinID:
XP_055148267
LinkDB
All DBs
Position
9:complement(56037517..56112623)
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AA seq
1337 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHPTHSPGQSSPRPVISQRVVTNKQAAPGFIGPQLPSHMIKNPPHLNGTGPLKDTPSSS
MSSPNGNSSVNRANPVNASASVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQCQSQPN
LHSNSLENPTKPVPSSTITNSAVQSTSNASTMSVSSKVTKPIPHSESCSQPVMNGKSKLN
SSVLVPYGAESSEDSDEESKGLGKENGIGAIVSSPSPGQDAEDEAAPHELQEPMTLNGAN
SADSDSDPKENGLPPDGASCQGQPALHSENPFAKANGLPGKLMPAPLPSLPEDKILETFK
LSNKLKGSTDEMSAPGAERDPPEDRDAEPQPGSPAAESLEEPDAAASLSSTKKAPPPPDP
GTPATKEGAWEAMAAAPEEPPPSAGQDIAGDTAPPDLCDPGSLTGDASPLPQDAKGMIAE
GPRDSALAEAPGGLSPAPPARSEEPCEQPLLVHPSEDHARDAPDPSQSSGAPEAAEGPPA
PVLDVAPASHPEWDAEPSPGERVEDAAAPKALGPSPVKEKIGSLRKVDRGHYRSRRERSS
SGELARDTRSNTEGHRHRRRRTCTRERDRQDRHAPEYHPGHSDRLSPGERRSLGRYSHHH
SRHRSGAEPDWVRHHYTECEHGWGREKFYPDRPRWDRCRYYHDRYARYAAQDWKPFHGGR
EHERQHKDHNRGRRSWEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCNL
PDRFHEHENGKSRKRRHDSVENSDSHVEKKAWRSEQKDTLEEPKAKKHKKSKKKKKSKDK
HRDRDSRHQQDSDLSAACSDADLHRHKKKKKKKKRHSRKSEDFVKDSELHLPRAASLETV
AQFRRAQGGFPLSGGPPLEGVGPFREKTKHLRMESRDDRCRLFEYGQGDLKLSLKTKNSL
VTIQRVQQKPSPSQLKL
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagctctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcattgaatgatgtgtcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcgagttcatctgtacctgataaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcatcgctcctccacagaaagttcttttcccatctgagaagatttgt
cttaagtggcaacaaactcatagagttggagctgggctccagaatttgggcaatacctgt
tttgccaatgcagcactgcagtgtttaacctacacaccacctctcgccaattacatgcta
tcacatgaacactccaaaacatgtcatgcagaaggcttttgtatgatgtgtacaatgcaa
gcacatattacccaggcactcagtaatcctggggacgttattaaaccaatgtttgtcatc
aatgagatgcggcgtatagctaggcacttccgttttggaaaccaagaagatgcccatgaa
ttccttcaatacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaatta
gacagacacacccaggccaccactcttgtttgtcagatatttggaggatacctaagatct
agagtcaaatgtttaaattgcaagggcgtttcagatacttttgatccatatcttgatata
acattggagataaaggctgctcagagtgttaacaaggcattggagcagtttgtgaagccg
gaacagcttgatggagaaaactcatacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatccatagatcctctaatgttcttacgctttctctgaaacgtttt
gcaaattttactggcggaaaaattgctaaggatgtgaaataccctgagtatctcgatatt
cggccatatatgtctcaacccaacggagagccgattgtctatgtcttgtatgcagtgctg
gtccacactggttttaattgccatgctggccattacttctgctacataaaagctagcaat
ggcctctggtatcaaatgaatgactccattgtatctaccagtgatattagatcggtactc
agccaacaagcctatgtgctcttttatatcaggtcccatgatgtgaaaaatggaggtgaa
cttactcatcccacccatagccctggccagtcctctccccgccccgtcatcagtcagcgg
gttgtcaccaacaaacaggctgcgccaggctttatcggaccacagcttccctctcatatg
ataaagaatccacctcacttaaatgggactggaccattgaaagacacaccaagcagttcc
atgtcgagtcctaacgggaattccagtgtcaacagggctaatcctgttaatgcttcagct
tctgtccaaaactggtcagttaataggtcctctgtgatcccagaacatcctaagaaacaa
aaaattaccatcagtattcacaacaagttgcctgttcgccagtgtcagtctcagcctaac
cttcatagcaattctttggagaaccctaccaagcccgttccctcttctaccattaccaat
tctgcagtacagtctacctcgaacgcatctacgatgtcagtttctagtaaagtaacaaaa
ccgatcccccacagtgaatcctgctcccagcccgtgatgaatggcaaatccaagctgaac
tccagcgtgctggtcccctatggcgccgagtcctctgaggactctgacgaggagtcgaag
ggactgggcaaggagaatgggattggtgcgattgtgagctccccctctcccggccaagat
gccgaagatgaggcagctccgcacgagctccaagaacccatgaccctaaacggtgctaat
agtgcagacagcgacagtgacccaaaagaaaacggcctgccgcctgatggtgccagctgc
caaggccagcctgccctgcactcagaaaatccctttgcgaaggcaaacggtcttcctgga
aagttgatgcctgctcctttgccgtctctcccagaagacaaaatcttagagaccttcaag
cttagcaacaaactgaaaggctcgacggatgaaatgagtgcacctggagcagagagggac
cctcccgaggaccgcgacgccgagccccagcctggcagccccgccgccgaatccctggag
gagccagatgcggccgccagcctcagcagcactaagaaggctccgccgccccctgatccc
ggcacccccgctaccaaagaaggcgcttgggaggccatggccgccgcccccgaggagcct
ccgcccagcgccggccaggacatcgcgggggacacagcaccccctgacctgtgtgatccc
gggagcttaacaggcgacgcgagcccgctgccccaggacgcaaaggggatgatcgcggag
ggcccgcgggactcggcattggcggaagccccgggggggttgagtccggctccgcctgcg
cggtcggaggagccttgcgagcagccactgcttgttcaccccagcgaggaccacgcccgg
gacgctccggacccatcgcagagctcgggcgcgccggaggccgcagagggaccgccagct
cctgtgttggacgtggccccggccagtcacccggaatgggacgctgagcctagccccggc
gaaagggtcgaggacgccgcggcgccgaaagccctaggcccttccccagtgaaggagaaa
atcggcagcctcagaaaggtggaccgaggccactaccgcagccggagggagcgctcgtcc
agcggggagctcgccagagacaccaggagcaacaccgagggccaccgtcaccggcggcgc
cgcacctgcacacgggagcgcgaccgtcaggaccgccacgccccggagtaccaccccggc
cacagcgacaggctcagccccggcgagcgccgctctctgggcaggtacagtcaccaccac
tcccgacaccggagcggagcggagccggactgggtcagacaccactatactgagtgcgag
catggctggggccgggagaagttctaccccgacaggccgcgctgggacaggtgccggtac
taccatgacaggtacgcccggtacgctgcccaggactggaagcccttccacggcggccgc
gagcacgagcggcagcacaaggaccacaaccggggccgtaggagctgggagcccgcccgg
gagagggagcggcaccgccccagcagcccccgtgcaggcgcgccccacgccctcgccccg
caccccgaccgcttctcccacgacagaactgcactggtagccggagacaactgtaacctc
cctgatcggtttcacgaacacgaaaatggaaagtcccggaaacggagacacgacagcgtg
gaaaacagtgacagtcatgttgagaagaaagcctggaggagcgaacagaaggatactcta
gaagagcctaaagcgaagaagcacaaaaaatcaaagaagaaaaagaaatccaaagacaaa
caccgagaccgcgactccaggcatcagcaggactcagacctctcagcagcgtgctctgac
gctgacctccacagacacaaaaaaaagaagaagaaaaagaagagacattcaagaaaatca
gaggactttgttaaagattcagaactgcacttacccagggccgccagcttggagactgtt
gcccagttccggagagcccagggtggctttcctctctctggtggcccgcctctggaaggc
gtcggacctttccgtgagaaaacgaaacacttacggatggaaagcagggatgacaggtgt
cgtctctttgagtatggccagggtgatttaaaactcagcctcaaaacaaaaaattcacta
gttacgattcaacgcgttcaacagaagccatccccatcccagcttaaattatag
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