Symphalangus syndactylus (siamang): 129489555
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Entry
129489555 CDS
T10134
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03430
Mismatch repair
ssyn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129489555 (PMS2)
03460 Fanconi anemia pathway
129489555 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129489555 (PMS2)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129489555 (PMS2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129489555
NCBI-ProteinID:
XP_055148287
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Position
9:56198333..56238603
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AA seq
873 aa
AA seq
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MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKD
YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHASAKVGTRLVFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKE
YAKMVQVLNAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCMHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDVNKLNVSQQPLLDIEGNLIKMHAADLEKPLVEKQDHSPSLRTREEKRDMSISRL
REAFSLHHTTENKPNSPKTPEPRRSRLGQERAMPSSSTSDAISDRGVLRPQKEAASSSQG
PSDPTDREEVEKDSGHGSTSVDSEGFSIPDTGSHCSSECAASSPEDRGSQEHGDSQEKAP
ETDDSFSDVDCHSNQEDTGCKFRVLPQPTNLASPNTKRFKKEEILSSSDIRQKLVNTQNV
SASQVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAA
EDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQG
QRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDENVMDFSQNCILLAPVTERAKLIS
LPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKK
LITHMGEMDHPWNCPHGRPTMRHIANLGVISQN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgagagctcgagtacagaacctgctaaggccatcaaacctattgatcgg
aagtcagtccatcagatttgctctgggcaggtggtactgagtctaagcactgcagtgaag
gagttagtagaaaacagtctggatgctggtgccactaatattgatctaaagcttaaggac
tatggagtggatcttattgaagtttcagacaatggatgtggggtagaagaagaaaacttc
gaaggcttaactctgaaacatcacacatctaagattcaagagtttgccgacctaactcag
gttgaaacttttggctttcggggggaagctctgagctcactttgtgcactgagcgatgtc
accatttctacctgccacgcatcggcgaaggttgggactcgactggtgtttgatcacaat
gggaaaattatccagaaaactccctacccccgccccagagggaccacagtcagtgtgcag
cagttattttctacactacctgtgcgccataaggaatttcaaaggaatattaagaaggag
tatgccaaaatggtccaggtcttaaatgcatactgtatcatttcagcaggcatccgtgta
agttgcaccaatcagcttggacaaggaaaacgacagcctgtggtatgcacaggtggaagc
cccagcataaaggaaaatatcggctctgtgtttgggcagaagcagttgcaaagcctcatt
ccttttgttcagctgccccctagtgactccgtgtgtgaagagtacggtttgagctgttca
gatgccctgcataatcttttttacatctcaggtttcatttcacaatgcatgcatggagtt
ggaaggagttcaacagacagacagtttttctttatcaaccggcggccttgtgacccagca
aaggtctctagacttgtgaatgaggtctaccacatgtataatcgacatcagtatccgttt
gttgttcttaacatttctgttgattcagaatgtgttgatatcaatgttactccagataaa
aggcaaattttgctacaagaggaaaagcttttgttggcagttttaaagacctctttgata
ggaatgtttgatagtgatgtcaacaagctaaatgtcagtcagcagccactgctggatatt
gaaggtaacttaataaaaatgcatgcagcggatttggaaaagcccctggtagaaaagcag
gatcattccccttcattaaggactcgagaagaaaaaagggacatgtccatttccagactg
cgagaggccttttctcttcatcacacaacagagaacaagcctaacagcccaaagactcca
gaaccaagaaggagccgtctaggacaggaaagggctatgccatcttctagcacttcagat
gccatctctgacagaggcgtcctgagacctcagaaagaggcagcgagttccagtcaggga
cccagtgaccctacggacagagaggaggtggagaaggactcggggcacggcagcacttct
gtggattctgaggggttcagcatcccagacacgggcagtcactgcagcagcgagtgtgcg
gccagctccccagaggacaggggctcgcaggaacatggggactctcaggagaaagcgcct
gaaactgacgactctttttcagatgtggactgccattcaaaccaggaagacaccggatgt
aaatttcgagttttgcctcagccaactaatctcgcatctccaaacacaaagcgttttaaa
aaagaagaaattctttccagttctgacattcgtcagaagttagtaaatactcagaacgtg
tcagcctctcaggttgatgtagctgttaaaattaataagaaagttgtgcccctggacttt
tctatgagttccttagctaaacgaataaagcagttacatcatgaagcacagcaaagtgaa
ggtgaacagaattataggaagtttagggcaaagatttgccctggagaaaatcaagcagcc
gaagatgaactaagaaaagagataagtaaaacgatgtttgcagaaatggaaatcattggt
cagtttaacctgggatttataataaccaaactgaatgaggatatcttcatagtggaccag
catgccacggatgagaagtataacttcgagatgctgcagcagcacaccgtgctccagggg
cagaggctcatagcacctcagactctcaacttaactgctgttaatgaagctattctgata
gaaaatctggaaatatttagaaagaatggctttgattttgttattgatgaaaatgtcatg
gatttttctcaaaattgtattcttttagctccagtcactgaaagggctaaactgatttcc
ttgccaactagtaaaaactggacctttggaccccaggacatcgatgaactgatctttatg
ctgagcgacagccctggggtcatgtgccggccttcccgagtcaagcagatgtttgcctcc
agagcctgtcggaagtcggtgatgattgggactgctcttaacaccagtgagatgaagaaa
ctgatcacccacatgggggagatggaccacccctggaactgtccccatggaaggccaacc
atgagacacattgccaacctgggtgtcatttctcagaactga
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