Symphalangus syndactylus (siamang): 129490080
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Entry
129490080 CDS
T10134
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04621
NOD-like receptor signaling pathway
ssyn05132
Salmonella infection
ssyn05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129490080 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129490080 (NOD1)
05133 Pertussis
129490080 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssyn04054
]
129490080 (NOD1)
Pattern recognition receptors [BR:
ssyn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129490080 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
ABC_tran
AAA_22
TTL
RsgA_GTPase
AAA_25
AAA_18
PIF1
Roc
Motif
Other DBs
NCBI-GeneID:
129490080
NCBI-ProteinID:
XP_055149496
LinkDB
All DBs
Position
9:99987180..100038828
Genome browser
AA seq
953 aa
AA seq
DB search
MEEQGYSEMEIIPSESHAHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCA
CPTQPDKVRKILDLVQSKGEEVSEFFLYLLQQLADAYVDLRPWLLEIGFSPSLHTQSKVV
VNTDPVSRYTQQLRHHLGSDSKFVLCYAQKEELLLEEIYMDSIMELVGFSNESLGSLDSL
ACLLDHTTGILNEQGETIFILGDAGVGKSMLLQRLQSLWATGRLDAGVKFFFHFRCRMFS
CFKQSDRLCLQDLLFKHYCYPERDPEEVFAFLLRFPHVALFTFDGLDELHSDLDLSRVPD
SSCPWEPAHPLVLLANLLSGKLLKGASKLLTARTGVEVPCQFLRKKVLLRGFSPSHLRAY
ARRMFPQRALQDRLLSQLEANPNLCSLCSVPLFCWIIFRCFQHFCAAFEGSPQLPDCTMT
LTDVFLLVTEVHLNRMQPSSLVQRNTRSPVETLRAGRDTLCSLGQVAHRGMEKSLFVFTQ
EEVQATGLQEGDMQLGFLRALPELGPGGDQQSYEFFHLTLQAFFTALFLVLDDRVGTQEL
LRFFQEWMPPGGAATASCYPPFLPFRCLRGSVLAREDLFKNKDHFQFTNLFLCGLLSKAK
QKLLRHLVPAAALRRKRKALWAHLFSSLRGYLKSLPRVQVESFNQVQAMPTFIWMLRCIY
ETQSQKVGQLAARGICANYLKLTYCNACSADCSALSFVLYHFSKRLALDLDNNNLNDYGV
RELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKIL
DECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHP
SLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKH
LWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcagggctacagtgagatggaaataatcccatcagagtctcacgcccacatt
caattactgaaaagcaatcgggaacttctggtcactcacatccgcaacactcagtgtctg
gtggacaacttgctgaagaatgactacttctcagccgaagatgcggagattgtgtgtgcc
tgccccacccagcctgacaaggtccgcaaaattctggacctggtacagagcaagggcgag
gaggtgtccgagttcttcctctacttgctccagcaactcgcagatgcttacgtggacctc
aggccttggctgctggagatcggcttctccccttcgctgcacactcagagcaaagtcgtg
gtcaacactgacccagtgagcaggtacacccagcagctgcgacaccatctgggcagtgac
tccaagttcgtgctgtgctatgcccagaaggaggagctgctgctggaggagatctacatg
gacagcatcatggagctggttggcttcagcaatgagagcctgggcagcctggacagcctg
gcctgcctcctcgaccacaccaccggcatcctcaatgagcagggtgagaccatcttcatc
ctgggcgatgctggggtgggcaagtccatgctgctgcagcggctgcagagcctctgggcc
acaggccggctagacgcaggggtcaaattcttcttccactttcgctgccgcatgttcagc
tgcttcaagcaaagtgacaggctgtgtctgcaggacctgctcttcaagcactactgctac
ccagagcgggaccctgaggaggtgtttgccttcctgctgcgcttcccgcatgtggccctc
ttcaccttcgacggcctggacgagctgcactcagacttggacctgagccgtgtgcctgac
agctcctgcccctgggagcctgcccaccccctggtcctgctggccaacctgctcagcggg
aagctgctcaagggggctagcaagctgctcacagcccgcacaggcgtcgaggtcccatgc
cagttcctgcggaagaaggtgcttctccggggcttctcccccagccacctgcgcgcctat
gccaggaggatgttcccccagcgggctctgcaggaccgcctgctgagccagctggaggcc
aaccccaacctctgcagcctgtgctctgtgcccctcttctgctggatcatcttccggtgc
ttccagcacttctgtgctgcctttgaaggctcaccacagctgcccgactgcacgatgacc
ctgacggacgtcttcctcctggtcaccgaggtccatctgaacaggatgcagcccagcagc
ctggtgcagcggaacacacgcagcccagtggagaccctccgcgccggccgggacactctg
tgctcgctggggcaggtggcccaccggggcatggagaagagcctctttgtcttcacccag
gaggaggtgcaggccaccgggctgcaggagggagacatgcagctgggcttcctgcgggct
ttgccggagctgggccccgggggtgaccagcagtcctatgagtttttccaccttaccctc
caggccttctttacggccctcttcctcgtgctggacgacagggtgggcactcaggagctg
ctcaggtttttccaggagtggatgccccctgggggggcagcgaccgcatcctgctatcct
cccttcctcccattccggtgcctgcggggcagcgttctggcgcgggaagacctcttcaag
aacaaggatcacttccagttcaccaacctcttcctgtgcgggctgttgtccaaagccaaa
cagaaactcctgcggcacctggtgcccgcggcagccctgaggaggaagcgcaaggccctg
tgggcacacctgttttccagcctgcggggctacctgaagagcctgccccgcgttcaggtt
gaaagcttcaaccaggtgcaggccatgcccacgttcatctggatgctgcgctgcatctac
gagacacagagccagaaggtggggcagctggcggccaggggcatctgtgccaactacctc
aagctgacctactgcaacgcctgctctgccgactgcagtgccctctccttcgtcctgtat
cacttctccaagcggctggccctggacctagacaacaacaatctcaacgactatggtgtg
cgggagctgcggccctgcttcagccgcctcactgttctcagactcagcgtaaaccagatc
actgacggtggggtaaaggtgctaagcgaagagctgaccaaatacaaaattgtgacatat
ttgggtttatacaacaaccagatcaccgatgtcggagccaggtacgtcaccaaaatcctg
gatgaatgcaaaggcctcacgcatcttaaactgggaaaaaacaaaataacgagtgaagga
gggaagtgtctcgccctggctgtgaagaacagcaaatcaatctctgacgttgggatgtgg
ggcaatcaagttggggatgaaggagcaaaagccttcgcagaggctctgcggaaccacccc
agcttgaccaccctgagtcttgcatccaacggcgtctccacagaaggaggaaagagcctg
gcgagggccctgcagcagaacacgtctctagaaatactgtggctgacccaaaatgaactc
aacgatgaagtggcagagagtttggcagaaatgttgaaagtcaaccagacgttaaagcat
ttatggcttatccagaatcagatcacagctaaggggactgcccagctggcagatgcatta
cagagcaacactggcataacagagatttgcctaaatggaaacctgataaaaccagaggag
gccaaagtctatgaagatgagaagcggattatctgtttctga
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