Symphalangus syndactylus (siamang): 129490164
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Entry
129490164 CDS
T10134
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129490164 (RNF38)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129490164 (RNF38)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129490164 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129490164
NCBI-ProteinID:
XP_055149694
LinkDB
All DBs
Position
9:108317218..108474683
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AA seq
652 aa
AA seq
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MSGSAAAAVAAAAASAAAAAAHFHPQSSSPRPGPAELGPPRRPRPPPPPPRPEPAATDRL
SPPGHGPLRAGAQGGGACGRAPGAGSVGASFQCQSIHHDHICHDDSDKMSSGANSASLPG
HPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTSA
SPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRRLPISIAARFSPRNRLCQ
ADAVFNNNLAGFQLQSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHP
PNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACST
QQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHH
PPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQF
LTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVG
PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLC
VVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcgccgccgccgcggtcgctgccgccgccgcctcagcagccgcggccgcc
gcgcactttcaccctcagtcgtcgtctcccaggccgggccccgccgagctcgggcccccg
cgccgcccgcgccccccaccgccgccgccccggccggagcccgccgccacggaccgcctc
agccctccgggccacgggcctctccgggcgggcgcccagggtggcggcgcctgcggccga
gcgccgggagcaggtagtgttggtgcttcttttcagtgccagtccatccatcacgaccac
atttgtcatgatgacagtgacaagatgtcttccggggccaattcagcatctctacctggc
catcctaacaaggtgatttgtgaaagggtgagacttcagagcctgttccctctcctccca
agtgatcagaacactaccgttcaagaggatgctcacttcaaagctttcttccagagtgaa
gatagtccaagtcctaagagacagcgcctctctcattcagtctttgattatacatcagca
tcaccagctccctcaccaccaatgcgaccatgggagatgacatcaaataggcagccccct
tcagttcgaccaagccaacatcacttctcaggggaacgatgcaacacacctgcacgcaac
agaagaaggttacctataagcatagctgccagattttctcccagaaacaggctgtgccaa
gcagatgcagtttttaacaataatctagcaggatttcagttacagagtcctcctgtcagg
cgccagagaggaagaagggatcgtctgtctcgacataattccattagtcaagatgaaaac
tatcaccatctcccttatgcacagcagcaagcaatagaggagcctcgagccttccaccct
ccgaatgtatctccccgtctgttacatcctgctgctcatccaccccagcagaatgcagtc
atggttgacatacatgatcagctccatcaagggacagtccccgtttcttacacagtaaca
acagtggcaccacatgggattccactctgcacaggccagcacatccctgcttgtagtaca
cagcaggtcccaggatgctctgtggttttcagtggacagcacctccctgtctgtagtgtg
cctcctccaatgcttcaggcatgttcagttcagcacttaccagtaccatatgctgcattc
ccaccccttatttctagtgatccatttcttatacatcctcctcacctttctccccatcat
cctcctcatttgccaccaccaggccagtttgtccctttccaaacacagcaatcacgatcg
cctctgcaaaggatagaaaatgaagtggaacttttaggagaacatcttccagtaggaggt
tttacttaccctccatcagcccaccccccaacattacctccatcagctcccttgcagttc
ttaacacatgatcctttgcatcaggaggtgtcctttggagtaccttatcctccatttatg
cctcggaggctcacaggacgtagtagataccgatcccagcagccaataccacctccccct
tatcatcccagcttactgccatatgtgttatcaatgcttccagtgccacctgcagtgggc
ccaactttcagctttgaattagatgtagaagatggagaagtagaaaattacgaggccctg
ttaaacctggcagagcgactgggagaggcaaagcctcgtggactgactaaagcagatatt
gaacaacttccttcttaccggttcaatcctaacaaccaccagtcagaacagactttgtgt
gtagtatgcatgtgtgattttgagtcaaggcagctgcttagagtcttaccctgtaaccac
gagttccatgccaagtgtgttgacaaatggcttaaggcaaatcgtacttgcccaatttgc
cgagctgatgcttcagaagtgcatcgggattcagaatga
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