Symphalangus syndactylus (siamang): 129490340
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Entry
129490340 CDS
T10134
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129490340 (FOCAD)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129490340
NCBI-ProteinID:
XP_055150077
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Position
9:complement(118680876..119003039)
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AA seq
1881 aa
AA seq
DB search
MMGKHFFWPKEVENPTRIDSQFITIIYLKIYLFTCLGTNEASTEAPKLEIYAFEDHQGNF
HPHRLAAENEAAHIHVREAKMSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQ
STNQTPALNLLWEKCCSDNVVVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHG
LIKAIMKLLQMQALKEGQGGEKNIQSIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQ
QCPERSEVSCIQIMAPFLWYLYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQ
ILQLCCDIVPCLQVKDLIQTTEAMMFIEEVYLSLLHHPVFWKIQLTQMTLQLLCVSEVSL
KITGECSSLIHLLEHSVELLKEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTE
DQKIPKSSLLLVMPILQILSSTALEDCISVDEEGPSRQQLALSLLEMIQQECYRDDYQKL
SYKLVCPVTSMYGSIFTAWRILEVMTDSSAASDWLASVESLLPITTVIPVPAFLLLAHLL
VEDKGQNLHQILKVTTELAQADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHK
VCIGQILRVIQLLGTTPRLRAVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQ
WEKLIAKAASIRDICKQRPYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAE
VVCIRSTWNALSPKLSCDTRPLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQ
NKDPIVANAAYRSLANFSAGEHTILHLPEKIRPEIPIPEELDDDEDDEDVDLSVPGSCYL
KLLSLTSPLVLPALEEFFTSLVKQEMVNMPRGIYHSALKGVARSDQGKTIAGIPNFILKM
YETNKQPGLKPGLAGGMLFCYDVSMYQSKDGKPLNRLMASRGRNFKQTSLALVHEVHIQL
SEWHRAIFLPQAWLAYMNRAYHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDM
LTDEITKAAAKESPVVKGNALLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVS
MVLDTLLVIVDSHYQPRGQLLSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKE
KVEEILNMLTARLPGKPSADESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKS
LDALENCCFDTSLEYNTGCILGVGLVLALMSHSSQMQSRVHVAASLRKLSAYLDDSGSQS
RTFQEVLSYTLSCVCTSAFSAGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNIVHGL
SVCGHGKAEDLGSKLLPAWIRIVLTEGTPTMLCLAALHGLVALVGSEGDVMQLKSEAIQT
SHFQGRLNEVIRTLTQVISVSGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPE
SSFIGAAIGFFITGGKKGPESVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNF
GEEIQQLCLEIMVTQAQSSQNAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDE
QILGFVENLMVAVFKAASPLRNPELCPSALQGLSQAMKLPSPAHHLWSLLSEATGKIFDL
LPNKIRRKDLELYISIAKCLLEMTDDDANRITQVTKSNIEKAAFVRLYLVSQGRFPLVNL
TDMLSVAVQHCEKEVLAWMFLHSLYQARIVSHANTGILKRMEWLLELMGYIRNVAYQSTS
FQNTALDEALDFFLLILATAVVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSP
MHRVTLQEVLTLLPNSMALLLQKEPWKEQTQKFIDWLFSIMESPKEALSAKSRDLLKATL
LSLRVLPEFKKKAVWTRAYGW
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaaacatttcttttggccaaaggaagttgagaatccaactcgcatagatagt
cagtttattactattatttatttaaagatttatctttttacttgcctggggaccaatgaa
gcatccactgaagctcctaaactggagatttatgccttcgaagaccatcaaggaaatttt
catccacacagattagcagctgaaaatgaagctgcacacatacatgtaagagaagcaaaa
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatcttattgctgcagtcctaaaggagaatggtttttcagaaaagattcaccaa
tctacaaatcagactcctgctttgaacttgctgtgggagaagtgttgcagtgacaatgta
gtggttcgaacagcctgctgtgaaggtctggtggccctcgttgctcaggaccatgcagag
ttcagctatgttctcaatgggatactcaacttgattccatcaaccagaaatacacatggc
ttgataaaagccattatgaaattactacaaatgcaagctcttaaggaaggacaaggtggg
gaaaagaatattcagagtatatataccattagaaatcatcctcatcctttgatcactgtg
cttgaacacagacctgattgctggccggtgtttttgcagcagctgacagcgtttttccag
cagtgccctgaaaggtcagaagtttcatgcattcaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttacaagaatatgctaaactccgactggccttgctgaaa
gtcttacttcaaccccaggttctttgtgacaaagatcaaccatcaatcctagaacagcag
atacttcaactgtgttgtgacatagttccatgtttgcaggtaaaagatttgatacagaca
acagaagcgatgatgtttattgaggaagtatatttaagccttttgcatcatcctgttttc
tggaaaattcagcttacccagatgactcttcagctgctgtgtgtcagtgaagtcagctta
aagataactggtgaatgttcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactacttctacagact
ccagcaagtcaacagaagccaatcttaaatctagctttgaagctcctctctgttactgag
gatcagaaaatcccaaagtcctctctgctgctagtgatgccaattctgcagatactatct
tctactgccttggaagactgtatatctgtggatgaagaaggtccctctaggcagcagttg
gctctaagccttttggaaatgatacagcaggaatgttacagagatgactaccaaaagctc
tcctacaagcttgtgtgccctgtaaccagtatgtatggttcaatatttacagcctggagg
attcttgaagtaatgacagactcgtctgctgcaagtgactggttggcttcagtagagtca
ttgcttcctattactactgtgatccctgtgcctgcctttcttctgctggctcacctcctt
gttgaagacaaaggacagaatcttcaccaaatactgaaggtcactacagaattagcccaa
gcagattcctcccaggtgccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctatattatataatgatatattgtatactttacctaagcttggtgttcacaag
gtgtgtataggacaaattctacgagtaatacaactacttggaaccacaccacgactaaga
gctgtcactttgcgcttgctgacatctttgtgggaaaagcaggaccgagtctatcctgaa
ctgcagcgtttcatggctatgtctgatgtaccttctctttcggtgggcaaggaagtccaa
tgggagaaactgattgcaaaagcagcatcaatcagagatatatgtaagcagaggccatat
caacatggtgcagatatgttggcagctatttctcaggtgttgaatgaatgcaccaagcct
gatcaagctactccagcagccttggtattacaaggtcttcatgcactctgtcaagctgag
gttgtttgcattcgctccacttggaatgctctctctccaaagctgagttgtgacacaaga
cctctcattctgaagacactgagtgaactattttctctagttccttccttaacagtcaat
acaactgaatatgagaattttaaagttcaagtcctcagcttcctctggactcatactcaa
aacaaggacccaattgtagcaaatgctgcatatagatccctggccaactttagtgcggga
gaacacaccattcttcatctccctgaaaagataagaccagaaattcccattcctgaagag
ttagatgacgatgaagatgatgaggatgtggatctttctgttcctggttcttgctatctc
aaactgttgtcactcacttcccctttggttttaccagctttggaggaattttttacatca
cttgtgaagcaagaaatggtgaatatgcctcgtgggatatatcactctgcattaaaagga
gttgcccgctcagaccaaggaaagactatagcaggaatccccaattttatattgaaaatg
tatgaaacaaacaagcaaccaggattgaaacctggccttgcaggtggtatgttattttgc
tatgatgtttccatgtatcagagtaaagatggaaaaccattgaatagactgatggccagt
agagggcgaaatttcaagcagacttcacttgctcttgtacatgaggttcatatccagctt
tcagagtggcaccgtgcgatttttcttccacaggcctggcttgcatacatgaatcgagct
tatcatgccattttacagggaagactaggagagctggagttgcagttaaaacatggaaaa
gaagaacctgaggaagtgcaatacaaaaaaagcacagcctggctctgggttagagacatg
ctgactgatgagatcaccaaggcagctgcaaaggagagtccggtagtgaaaggtaatgcg
ctgttagctctaagcagccttgctgtcgtcgtatctagacatgaagccagcctctcttca
gactctgatgggctcctggaggttcaacctaatttcctttcaatgaaagagtgggtttcc
atggtacttgatacactcttggtcattgtggatagccattaccaacccagagggcaactt
ctctcctggttttattataagtcctattctggtgaaaacacagctagtgccattgcccgt
tctgctgccgccacggctttgtctctccttgtgccagttttcattatctcttgtaaagag
aaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagtgctgat
gagtctcaagccgtgcaaatccacatgggccttgctttagggatgtttctctctcgcttg
tgtgaagagaaactcagtgatatatctggccaagagatgaaccttcttctgatgaagtcg
ttggatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggctgtata
ttgggagttggacttgttctggccctcatgagccacagcagccaaatgcagtcccgcgtt
catgtggcagcatcgcttcggaagctgtctgcgtacctagatgacagtgggagccagagc
agaacatttcaggaggtcctttcctacacacttagctgtgtatgtacatcagcgttcagt
gctggaattattgaggctacagaggctgaggatgttatgaacaagcttcgactgttagtg
gagaatagccagcagacttcaggttttgccctggctttaggaaacatagttcatggattg
tctgtgtgtggacatggaaaagctgaagacttgggcagcaaactactccctgcctggatc
agaattgttctaacagagggcactcccacaatgctttgtctggcagctcttcatggcctg
gtggccttggtaggctctgaaggggatgtaatgcagctgaaatcagaagccatccagacc
tctcattttcaaggcagacttaatgaagtcatcagaaccttaactcaggtcattagtgtc
tctggggtgattggtctccagtcaaatgcagtctggcttcttggacatcttcatctatct
actctatcctcaagtcaaagtagagcctctgttcctactgactatagctatttgcccgaa
agcagttttattggagcagccattggcttcttcattacaggaggaaaaaaaggtcctgaa
tctgtgcctccttcgctccttaaagtagtgatgaaacccatagcaactgttggagaaagc
taccaatatcctcctgtgaactgggctgcacttctctctccacttatgaggctaaatttt
ggtgaagagatccagcaactgtgccttgaaattatggtgacccaggcacagtcatcccag
aatgccgctgcactattgggcttgtgggtgacaccaccactgatccacagtctgagtctg
aataccaagagatatctcctgatatctgcacctctgtggataaaacacatctctgatgaa
cagatcctgggttttgttgaaaatttaatggtggcagtttttaaagcagcttccccactt
agaaatcctgagctatgcccaagtgctttacagggtctgagccaggccatgaaactgccc
agccctgcccaccacctctggagtctgctctctgaagctactgggaaaatttttgacctc
ctgccaaataagattcggagaaaggatctagagctgtatatcagcatagcaaaatgcctc
ttagaaatgacagatgatgatgccaatcggatcacccaggttactaagagcaacatagaa
aaggctgcctttgtcagactgtacttagtctctcaaggacgattccccttggtgaacctg
accgatatgctgagtgttgctgtgcagcactgtgagaaagaggtgttggcctggatgttt
ctgcacagcttataccaggcacggattgtgagccatgccaacacgggcattttgaagaga
atggagtggctcttggaactgatgggttatattagaaatgttgcttaccagtcaacatcc
tttcagaatacggctcttgacgaggctttggacttcttcttgctgatattggcaaccgca
gtggttgcatgggctgaccacactgcccccctcctcctcggtctcagtgccagttggttg
ccatggcatcaggagaatggcccagctgggccagtaccaagcttccttggcaggagtcca
atgcacagggtcactctgcaggaggttctcactctccttcccaatagcatggctctgctg
ctgcagaaagagccatggaaggaacagacccagaagttcattgactggctattcagcatc
atggaaagccctaaagaagccctctcagcaaagtccagggatcttttgaaagccaccctg
ctgtccttgagagttctcccagagtttaagaagaaagctgtatggaccagagcgtatggt
tggtga
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