Symphalangus syndactylus (siamang): 129490346
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Entry
129490346 CDS
T10134
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129490346 (DENND4C)
Membrane trafficking [BR:
ssyn04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129490346 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
129490346
NCBI-ProteinID:
XP_055150097
LinkDB
All DBs
Position
9:complement(120342340..120487240)
Genome browser
AA seq
1958 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDTKSTGPKAPITDIAVIIKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERLIPGCEVILA
TPYGRCANVNNSSTTSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVFLCYKKSVPASNAIAYKAGLIFRYPEEDYESFPLSESDVPLFCLPMGAT
IECWDPETKYPLPVFSTFVLTGSSAKKVYGAAIQFYEPYSRELLSEKQLMQLGLLTPVER
KMVSKSINTNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPS
PQRPRILVQLSVHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLESKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPLPFIVGVDSRYFDLHDP
PQDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPCKNLLSTLKKLYPQLSSVHRKTQEGSAI
DMTPIEADFSWQKKMTQLEMEIQEAFLRFMASVLKGYRTYLRPITEAPSNKATAADSLFD
RQGFLKSRDRAYAKFYTLLSKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEK
TDKVDFDSAEDTRLIELDDSQKSEHTVFIMPPEPPPDDGKDLSPKYSYKYFPRLDLKLFD
RPQELKLCFSRHPTGNSITKSPALMAKRTKQEIKTAHKLAKRCYTNPPQWAKCLFSHCYS
LWFICLPAYVRVSHPKVRALQQAYDVLIKMRKTDVDPLDEVCYRVVMQLCGLWGHPVLAV
RVLFEMKTARIKPNAITYGYYNKVVLESPWPSSTRSGIFLWTKVRNVVRGLAQFRQPLKK
TVQRSQVSSISALQNVTGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLESIDNHSST
GGQSDQGYGSKDELIKDDAEIHVPEEQAARELITKTKMQTEEVCDASAIVAKHSQPSPEP
HSPTEPPAWGSSIVKVPSGIFDTNSRKSSTGSISNVLLSTQDPVEDAVFGEATNLKKNGD
KGEKRQKHFPERSCSFSSESRAGMLLKKSSLDSNSSEMAIMMGADAKILTAALTCPKTSP
LHIARTHSFENVSCHLPDSRTCVSESTWNPEHRSSPVPEMLEESQELLEPVVDDVPKTTA
TENTYESLLSDSNSNQSRDLKTVSKDLRNKRSSLYGIAKAVEREDVETGLDPLSLLATEC
TGGKTPDSEDKLFSPVIARNLADEIESYMNLKSPLGSKSSSMELHGEENRESGMTTAFIH
ALERRSSLPLDHGSPTQENPESEKSSPAVSRSKTFTGRFKQQTPSRTHKERSTSLSALVR
SSPHGSLGSVVNSLSGLKLDNILSGPKMDVLKSGMKQAATVASKMWVAVASAYSYSDDEE
ETNRDYSFPAGLEDHILGENISPNTSISGLIPSELTQSNTSLGSSSSSGDVGKLHYPTGE
VPFPRGLKGQDFEKSDHGSSQNTSMSSIYQNCAMEVLMSSCSQCRACGALVYDEEIMAGW
TADDSNLNTACPFCKSNFLPLLNIEFKDLRGSASFFLKPSTSGDSLQSGSIPLANESLEH
KPVSSLAEPDLINFMDFPKHNQIITEETGSAVEPSDEIKRASGDVQTMKISSVPNSLSKR
NVSLTRSHSVGGPLQNIDFTQRPFHGISTVSLPNSLQEVVDPLGKRPNPPPVSVPYLSPL
VLRKELESLLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNEG
VQLPLSSLSQDSKLVYIQLLWDNINLHQEPREPLYVSWRNFNSEKKSSLLSEEQQETSTL
VETIRQSIQHNNVLKPINLLSQQMKPGMKRQRSLYREILFLSLVSLGRENIDIEAFDNEY
GIAYNSLSSEILEKLQKIDAPPSASVEWCRKCFGAPLI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggaccaagagtgacagactactttgtcgtagctggtctcactgac
acatctactcttttggatcaagaaataaatcgtttagatactaagtcaactggacctaaa
gctccaattacagacattgccgttattatcaaatcagctggagaaacagtacctgaaggt
tacacctgtgtagaagccactccatcagctctccaagcaaacttgaactacggaagtctg
aaaagcccagaacttttcctctgttataagagagggagagataaaccaccacttacagat
attggagttctatatgaagggaaagaacggcttattccaggatgtgaagtgatcctagcc
acaccctatggtcgctgtgccaatgtcaacaatagttcaactacttcacaaagaatcttt
atcacttatcgaagggctcctccagttcgaccccagaattccttggctgtaactgatatc
tgtgttattgtaaccagtaaaggagaaactcctcctcataccttctgcaaagttgacaaa
aacttaaattgtggaatgtggggttccagcgtgtttctgtgttataagaagtctgtacct
gcttcaaatgcaatagcatataaggctggtttaatttttagatatccagaagaggactat
gagtcatttccactctcagaatcagatgtacctcttttctgccttcctatgggagctact
attgagtgctgggatcctgaaaccaaatatccacttccagttttttcaacttttgtcttg
acaggttcttcagccaaaaaggtatatggagctgccattcagttttatgaaccttactct
cgggaacttctatcagagaaacagcttatgcagctgggcttgttgacgcctgtggagaga
aaaatggtctccaaatccatcaatacaaacaaatgcatttgtttactctcacactggcct
ttttttgaagcttttaggaaatttcttatgtttatctacaaactttctgtgtctggacca
catcctcttcccattgaaaagcacatttcacattttatgcaaaacatcccttttccttca
ccacaaagaccgagaatccttgtccagctgtcagtccatgatgcattaatattatcacag
ccggtttctacacctttaccactaagtggagccaactttagcaccttgctaatgaatctg
ggtcctgagaattgtgcaacactgctgctctttgttttacttgagagtaaaattctgctg
cattctcttaggccagctgtcttgactggggtagctgaagctgttgtagctatgatcttt
ccatttcagtggcaatgcccatatattcccctttgtcctctttcactggctgcagtgctt
agtgcacctttaccatttatagttggagttgactcaaggtattttgatcttcatgaccca
ccacaagatgttgtttgcattgacttggatacgaacatgttatatgtatcagatgaaaag
aagaacatgaactggaagcaacttcccaaaaagccgtgcaaaaatctacttagcacctta
aagaaattgtatccccagctgtcttcagttcaccgaaaaactcaagaaggctcggcgatt
gacatgactccaattgaagcagatttctcctggcaaaagaagatgacacagcttgagatg
gaaattcaagaggcatttttgcgctttatggcgtctgttttaaaaggatatagaacatat
ctcagaccaatcacagaggctccttcaaataaagccacagctgctgattcattgtttgac
cgacagggatttttaaaaagtcgagatcgtgcctatgcaaaattctatacccttttatcc
aaaacacagatttttattcgtttcattgaagaatgcagttttgtaagtgataaagatact
ggattagcattttttgatgactgcatagaaaagttgtttcctgataaaggcacagagaaa
acagataaggttgattttgattcagcagaagataccagattgatagaactagatgattca
cagaaaagtgagcatactgtatttataatgccgccagagccacctcctgatgatggaaag
gacctgtcaccaaagtacagttacaaatactttccaagactggaccttaagctttttgac
agaccgcaggagttgaaactttgttttagtagacaccctactgggaatagcattacaaag
agtccagctctcatggctaagagaactaaacaggagataaaaacagctcataaattggcg
aagagatgttatacaaatccaccacagtgggccaagtgtctgttcagtcattgttacagt
ttatggtttatttgtcttccggcctatgttagagtttctcatcctaaagtcagagcactt
cagcaggcatatgatgtacttattaagatgaggaaaacagatgtggatcccttagatgag
gtgtgctatcgagtagtgatgcagctttgtggactttggggtcatcctgttttagcagtg
agagtcttatttgaaatgaaaactgctaggataaagcctaatgctattacttatggttat
tataataaggtagttttggagagcccgtggcctagcagtacccgcagtggtatcttctta
tggacgaaggtacggaatgtggtacgtggcttggcacagtttaggcagccgcttaaaaag
actgtgcaaaggtcacaggtctcctcaatatcagctcttcaaaatgtcacaggtggaagt
gatggggacacggtgagccatggtagcgtggatagttctaatgatgctaacaatggggag
cacacagtcttcgtcagagatttaatcaggcttgagtccattgataatcactctagcaca
ggtggtcagtctgaccaaggatatgggtctaaggatgaacttataaaggatgatgcagaa
attcatgtgcctgaagaacaagcagcaagagaattgataactaaaacaaaaatgcaaaca
gaagaggtgtgcgatgcctccgctattgtggcaaaacattcacaacctagtccagagcct
cacagtcctactgaacctcctgcctggggcagcagtattgtgaaagttccatctggtata
tttgataccaacagcaggaaaagtagcactggtagtatatcaaatgtgctgctttctact
caagatccagttgaagatgcagtctttggcgaagctactaacctcaagaagaatggtgat
aaaggagaaaaaagacaaaagcattttcctgagaggagttgtagttttagttctgaaagt
cgagcaggaatgttgcttaagaagagtagtttggattcgaattcaagtgaaatggctatc
atgatgggagcagatgccaagattctcacagcagcattgacatgtcctaagacttctcca
cttcatatcgcaagaacccatagctttgagaatgttagctgtcacctacctgatagtagg
acttgtgtgtctgaaagcacttggaatcctgagcacagatcatctccggtgccagagatg
cttgaggaaagccaagaactccttgagcctgtggttgatgatgtacctaaaactactgca
acagagaatacatatgagagtctactaagtgatagtaacagtaatcagtccagagacttg
aaaacagtatccaaagatctgaggaataagagaagtagtttatatggtattgccaaggcg
gttgagagggaagatgttgaaactggactagatcctttgtctcttttagccactgaatgt
actgggggaaaaactcctgattctgaagataagttgttttctccagttattgcacgtaat
ctggctgatgaaatagaaagctatatgaacctaaaaagtcccctaggtagtaaatcttct
agtatggaattacacggagaggaaaacagagagtctggcatgactactgcatttattcat
gctttagagaggagatcaagcctacctttagatcatggttcaccaacacaggaaaatcct
gaaagtgaaaagagctcgcctgcagtgtccaggtctaaaacttttactgggcgtttcaag
cagcaaaccccgtctcgaactcataaagagcgttcaacttctttgtcagcgctggtgcgt
tcttcgccacatggctcgttgggttctgtagtaaattctttgtcagggctaaagctggat
aatatactctcagggcccaagatggatgtcctaaaatctggtatgaaacaagcagcgaca
gtagccagtaaaatgtgggtagctgttgcatctgcctacagctactcagatgatgaggag
gaaactaatagagactacagcttcccggctggcctagaagaccatattttgggggagaat
atatcgcctaacacaagtatctcagggttgatccccagtgaacttacccagagcaacaca
agtcttggcagtagcagcagtagtggagatgtaggaaaactgcattatccaacaggtgaa
gttccatttccaagaggcctgaaagggcaagactttgaaaaatcagatcatggttcttct
caaaataccagcatgtctagcatctatcagaattgtgcaatggaggttttgatgtccagt
tgttcacagtgtagagcttgtggagctttagtttatgatgaagaaattatggctggatgg
acagcagatgactcaaatttgaataccgcttgtccattctgtaaaagcaacttcttgcct
cttctcaatatagaattcaaagatttgagaggttctgcaagctttttcctgaaaccaagc
acctctggtgacagtttacaaagtggaagcattccattggcaaatgaatccttggagcac
aaacctgtatccagtttagcagaacctgacttgatcaactttatggatttcccaaaacat
aaccagatcataactgaagaaacaggctctgcagttgaaccaagtgatgaaataaagaga
gccagtggagatgtccaaactatgaaaatttcatctgtgcctaatagtttatcaaagcga
aatgtgtctttgactcgaagtcacagtgttggaggccccttgcagaatattgactttacc
cagcgaccgtttcatggcatttcaacagttagtcttccaaacagtctgcaggaagttgtg
gatcctttaggaaaaagacccaatcctccccctgtttctgtgccctacttgagtcctcta
gtactccgtaaagaacttgaatctttgctagaaaatgaaggtgatcaggtgattcatacg
tcttctttcatcaatcaacatccaatcattttctggaacctcgtttggtatttcagacgt
ttggaccttcctagtaacttgccaggacttatcctcacatctgaacattgtaatgaaggt
gtacagcttcctctgtcatctctatcccaggatagcaaacttgtgtatattcagctgtta
tgggataatatcaaccttcatcaggaaccaagagaacctctgtatgtctcatggaggaat
tttaattctgaaaagaaatcatctctcctgtcagaggaacaacaagaaacaagcacttta
gtagaaaccatcaggcagagtattcagcacaataatgttcttaaacccatcaacctactt
tcacagcaaatgaagccaggcatgaaaagacaaaggagtttatacagagaaatcctcttc
ttatcattagtgtctctaggaagagagaatattgatattgaggcatttgacaatgaatat
ggaattgcatacaatagtctgtcttcagagattcttgaaaagttgcagaaaattgatgct
ccaccaagtgccagtgtcgagtggtgcaggaagtgttttggagcacctctcatttaa
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integrated database retrieval system
