Symphalangus syndactylus (siamang): 129491058
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Entry
129491058 CDS
T10134
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129491058 (SCN11A)
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129491058 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
129491058
NCBI-ProteinID:
XP_055150778
LinkDB
All DBs
Position
1:122014223..122111800
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AA seq
1790 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTGEVPQPQPQLDLKASR
KLPKLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGITIVSYIPGITIKVLSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCILKDCKNISNMEAYDHC
FEKKENSTEFKMCGTWMGNSTCSIQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTTGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPKKRKLFGNKKRKSFFLRESGKDQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHGDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPQWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEDSFEKMLNTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVISSK
FQKGSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFNSRKSKKLCDPTVSCLRHWHMEDFWHSFLVVFRILCGEWIENMWECMQEANGS
SSSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFRR
AFCFVRHTLEHFCHKWCRKQNLPQQKEVTGGCPAQSKDIIPLVMEMKRSSETQEELGILT
SVPKTLGVRHDWTWLAPLAEEEDDVEFSGEDNAQRITQPEAEQQAYELHQENKKPTSQRV
PSVEIDMFSEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGWLPEMVPKKEPERCLPK
GFGCCFPCCSLDKRKPPWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLE
KQPKIQELINCTDMIFTYIFIGEMVLKWVAFGFGKYFTSAWCCLDFIIVIISVTTLINSK
ELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFS
GKFGKCVNGTDSVINSTIITNKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGWMD
IIYAAVDSREKEQQPEFESNSLGYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDVVTSQIFDIVIISLIILNMI
SMMAESNNQPEAMKSILDHLNLVFVVIFTLECLIKIFALRQYYFTNGWNLFDCVVVLLSI
VSTMISTLENQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFASSMLCLFQISTSAGWDSLLSPML
RSKESCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLCED
DFDIFYEVWEKFDPEATQFIKYAALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLH
CMDILFAFTARVLGGSDGLDSMKAMMEEKFMEANPLKKLYEPIVTTTKRKEEERGAAIIQ
KAFRKYMMKVTRGDQGDQNDLENRPHSPLQTLCNGDLSSFGVAKGKVHCD
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaagagaaaaagaagtct
aaagaccagacaggagaagtaccccagcctcagcctcagcttgacctaaaggcctccagg
aagttgcccaagctctatggcgacattcctcgtgagctcataggaaagcctctggaagac
ttggacccattctaccgaaatcataagacattcatggtgttaaacaaaaagaggacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattattcagcatgttcattattggcaccgttatc
atcaactgtgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgatcaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattggaataacgattgtgtcatatattccaggaatcaccatcaaagtgttgtcc
ctgcgtaccttccgtgtgttcagagctttgaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaacgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagtctgaac
ctgaaatgcatcttgaaggactgtaaaaatatcagtaacatggaagcttatgaccattgc
tttgaaaagaaagaaaattcgactgaattcaaaatgtgtggcacctggatgggtaacagc
acctgttccatacaatatgaatgtaaccataccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggctgatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactactgggctctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaactctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttgaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttcccttgaaacatcatattttaccccaaaaaagagaaagctc
tttggtaataagaaaaggaagtccttctttttgagagagtctgggaaagaccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagaacaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatggagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgtggagaaaacctggcatccaagtacctcgtgtggaactgctgc
ccccagtggctgtgcattaagaaggtcctgagaacggtaatgactgacccatttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggaggacagtttcgagaagatgttgaatacagggaatttggttttcactggcattttt
atagcagaaatgtgcctaaaaatcattgcgctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaataagcagtaaa
tttcaaaagggaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gccaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatg
cagctttttggccatagcttcaattcccgaaagagtaaaaaactctgtgacccgacagtc
tcatgtttacggcactggcacatggaggatttctggcactccttcctagtggtattccgc
atcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagcgaatggatca
tcatcatcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaacttgtg
gtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaatgga
aacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattccgccgg
gctttttgttttgtgaggcacactcttgagcatttctgtcacaagtggtgcaggaagcaa
aacttaccacagcaaaaagaggtgacaggaggctgtcctgcacaaagcaaagacatcatt
cccctggtcatggagatgaaaaggagctcagagacccaggaggagcttggtatactaacc
tcagtaccaaagaccctgggcgtcaggcatgattggacttggttggcaccacttgcggag
gaggaagatgatgttgaattttctggtgaagataatgcacagcgcatcacacaacctgag
gctgaacaacaggcctatgagctccatcaggagaacaagaagcccaccagccagagagtt
ccaagtgtggaaattgacatgttctctgaagatgagcctcatctgaccatacaggatccc
cgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatcttcaggat
ggctttggatggttacctgagatggttcccaaaaaggaaccagagagatgtttgcccaaa
ggctttggttgctgctttccatgctgtagcttggacaagagaaagcctccctgggtcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagcttt
attatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcacctcgag
aaacaacccaaaatccaagaattaataaattgtactgacatgatttttacatatatcttt
atcggggagatggtactaaaatgggtagccttcggatttggaaagtatttcaccagtgcc
tggtgctgccttgatttcatcattgtgattatctctgtgaccaccctcattaactcaaag
gaattgaagtccttccggactctacgagcactgaggcctcttcgcgcgctgtcccagttt
gaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttttct
ggaaaatttgggaaatgcgttaatggaacagactcagttataaattctaccatcattaca
aataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaactttgac
aatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatggat
attatatatgcagctgttgattccagagagaaagaacaacagccagagtttgagagcaat
tcactcggttacatttacttcgtagtctttatcatcttcggctcattcttcactctgaat
ctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggccaa
gacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaaacccattccacggcctctgaacaaatgtcaaggtctcgtgttcgat
gtagtcacaagccagatctttgacatcgtcatcataagtctcattatcctaaacatgatt
agcatgatggctgaatcaaataaccaacccgaagccatgaaatccatccttgaccatctc
aacttggtctttgtggtcatctttacattagaatgtctcatcaaaatctttgctttgagg
caatactacttcaccaatggctggaatttatttgactgtgtggtcgtgcttctttccatt
gttagtacaatgatttctaccttggaaaatcaggagtacattcctttccctccgacgctc
ttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggctgcacga
ggaatcaggactctcctctttgctctgatgatgtcacttccttctctgttcaacattggt
cttctactctttctgattatgtttatctatgccattttgggtatgaactggttttccaaa
gtgaatccagagtctggaattgatgatatattcaacttcaagacttttgccagcagcatg
ctctgtctcttccagataagcacatcagcaggttgggattccctgctcagccccatgctg
cgatcaaaagaatcatgtaactcttcctcagaaaactgccacctccctggaatagccaca
tcctactttgtcagttacattatcatctcctttctcattgttgtcaacatgtacattgct
gtgattttagagaacttcaacacagccactgaagaaagtgaggaccctttgtgtgaagat
gactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaatttatc
aaatatgctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtcgcaaag
ccaaataaatatcaatttctagtaatggacttgcccatggtgagtggagatcgcctccac
tgcatggatattcttttcgccttcaccgctagggtactcggtggctctgatggcctggat
agcatgaaagcaatgatggaagagaaattcatggaagccaatcctctcaagaagttgtat
gaacccatagtcaccaccaccaagagaaaggaagaggaaagaggtgctgctattattcaa
aaggcctttcgaaagtacatgatgaaggtgaccaggggtgaccaaggtgaccaaaatgac
ttggaaaacaggcctcattcaccactccagactctttgcaatggagacttgtctagcttt
ggggtggccaagggcaaggtccactgtgactga
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integrated database retrieval system
