Symphalangus syndactylus (siamang): 129491061
Help
Entry
129491061 CDS
T10134
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129491061 (SCN10A)
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129491061 (SCN10A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
YfdS_N
Motif
Other DBs
NCBI-GeneID:
129491061
NCBI-ProteinID:
XP_055150791
LinkDB
All DBs
Position
1:122164366..122255387
Genome browser
AA seq
1959 aa
AA seq
DB search
MEFPIGSLETNNFRRFTPESLVEIEKQIAAKHATKKAREKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKPDI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTTSLHSHNGSPLTSKNASERRHKIKPRVSEGSTEDNKSP
RSDPYNQRRMSFLGLASGKRRASHGSVFHFRSPGRDISLPEGVTDDGIFPGDHESHRGSL
LLGGGAGQHGPLPRSPLPQPSNPDFRHGEDEHQPPPTSELAPGAVDVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLAQKYLIWDCCPMWVKLKTI
LFGLVTDPFAELTITSCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRPCPFPRPKAEPELVVKLPLSSSK
AENHIAANTARGSSGGLQAPRGPRDEHSDFVANPTVWVSVPIAEGESDLDDLEDDGEEDA
QSSQQEVIPKGQQEQLQQVERCEDHLTPRSPGTGTSSEDLAPSLGETWKDESVPQAPAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRRCPCCKVDTTKSPWDV
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDRKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPQNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLVFS
AILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPCVPRAEEEAASLPDEGFVAFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQNEDEATSMEVTAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccattggatccctcgaaactaacaacttccgtcgctttactccggagtca
ctggtggagatagagaagcaaattgctgccaagcacgcaacaaagaaagccagagagaag
catagggagcagaaggaccaagaagagaagcctcggccccagctagacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactgatcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
gtcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgaa
tatgtcttcactgtcatttacaccttcgaagccttgataaagatactggcaagaggattt
tgtctaaacgagttcacgtacctgagagatccttggaactggctggattttagtgtcatt
acgctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattaaaaacagtttctgtgatcccaggcctgaaggtcattgtaggg
gctctgattcactcagtgaagaaactggctgatgtgaccatcctcaccatcttctgcctg
agtgtttttgccttggtggggctgcaactcttcaagggcaacctcaaaaataaatgtgtc
aagaatgacatggctgtcaatgagacaaccaactactcatctcacagaaaaccagatatc
tacataaataagcgaggcacttctgatcccttactgtgtggcaatggatctgactcaggc
cactgccctgatggttatatctgccttaaaacttctgacaacccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcgtatgaggagcagaaccaggcaaccattgatgaaattgaagcaaaggagaagaag
ttccaggaggccctcgagatgctccggaaggagcaggaggtgctagcagcgctagggatt
gacacaacctctctccactcccacaatggatcacctttaacctccaaaaatgccagtgag
agaaggcataaaataaagccaagagtgtcagagggctccacagaagataacaaatcaccc
cgctctgatccttacaaccagcgcaggatgtcttttctaggcctcgcctctggaaaacgc
cgggctagtcatggcagcgtgttccatttccggtcccctggccgagatatctcactccct
gagggagtcacagatgatggaatctttcctggagaccacgaaagccatcggggctccctg
ctgctgggtgggggtgctggccagcatggccccctccctagaagccctcttcctcaaccc
agcaaccctgacttcaggcatggagaagatgaacaccaaccgccacccactagtgagctt
gcccctggagctgtcgatgtctcggcattcgatgcaggacaaaagaagactttcctgtca
gcagaatacttagatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaactcgaggaatctgaacagaagtgcccaccctgcttgaccagc
ttggctcagaagtatctgatctgggattgctgccccatgtgggtgaagctcaagacaatt
ctctttgggcttgtgacggatccctttgcagagctcaccatcacctcgtgcatcgtggtg
aacaccatcttcatggccatggagcatcatggcatgagccctaccttcgaagccatgctc
cagataggcaacattgtcttcaccatattttttactgctgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtattcaagctggccaagtcctggcccaccttaaacacactcatc
aagatcatcggaaactcagttggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagctcctaggggaaaactaccgtaacaaccga
aaaaatatctccgcgccccatgaagactggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccaaaaatccatatgtctcatccttttcttgacggtgatggtgctaggg
aatctggtggtgcttaacctgttcatcgccctgctgttgaactctttcagtgctgacaac
ctcacagccccagaggatgatggggaggtgaacaacctgcaggtggccctggcacggatc
caggtctttggccatcgtaccaaacaggctctttgcagcttcttcagcaggccctgccca
ttccccaggcccaaggcagagcccgagctggtggtgaaactcccactctccagctccaag
gctgagaaccacattgctgccaatactgccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcgtcgctaatcctactgtgtgggtctctgtg
cccattgctgaaggtgaatctgatcttgatgacttggaggatgatggtgaggaagatgct
cagagctcccagcaggaagtgatccccaaaggacagcaggagcagctgcagcaagttgag
aggtgtgaggaccacctgacacccaggagcccaggcactggaacatcttctgaggacctg
gctccatccttgggtgagacgtggaaagatgagtctgttcctcaggcccctgccgaggga
gtggacgacacaagctcctctgagggcagcacggtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcagatgacctagaagaaccagatgattgcttcacagaa
ggatgcattcgccgctgtccctgctgcaaagtggataccaccaagagtccatgggatgtg
ggctggcaggtgcgcaagacttgctaccgtattgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggccttcgaagactattacctggac
cggaagcccacggtgaaagctttgctggagtacactgacagggtcttcacctttatcttt
gtgttcgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgataagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaacccttcgtgctctgcggcca
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctcttcgcagggaagttttggagatgcatcaactataccgatggagag
ttttctcttgtacctttgtcgattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttac
cttgcacttctgcaggtggcaacctttaaaggctggatggacattatgtatgcagctgtt
gattcccgggaggtcaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
tttgtcatcttcatcattttcggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaagttgggctccaagaagccccagaagccc
atcccacggccgcagaacaagttccagggttttgtctttgacatcgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccagagtgaagaaaagacgaaaattctgggcaaaatcaaccagttctttgtggcc
gtcttcacaggcgaatgcgtcatgaagatgttcgctttgaggcagtactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctctccattgcgagcctcgttttttct
gcaattcttaagtcacttcaaagttacttctccccgacgctcttcagagtcatccgcctg
gcccgaattggccgcatcctcagactgatccgagcagccaagggcatccgcacactgctc
tttgccctcatgatgtccctgcctgccctcttcaacatcgggctgctgctcttccttgtc
atgttcatctactccatcttcggtatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggccggctgggatggcctcctcagccccatcctcaacacagggcccccctac
tgtgaccccaatctgcccaacagcaatggcaccagaggggactgtgggagcccagccgta
ggcatcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtac
atcgcagtgattctggagaacttcaatgtggccacggaggagagcaccgagcccctgagt
gaggacgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcggattttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggtccctggagataag
atccactgcttggatatcctttttgctttcaccaagaatgtcctaggagaatctggggag
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaagca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctctaacacccca
tgtgtgcccagagctgaggaggaggctgcatcactcccagatgaaggttttgttgcattc
acagcaaatgaaaattgtgtactcccagacaaatctgaaactgcatctgcgacatctttc
ccaccgtcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatct
agctcaatacaaaatgaagatgaagccaccagtatggaggtgactgcccctgggccctag
DBGET
integrated database retrieval system
