Symphalangus syndactylus (siamang): 129491201
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Entry
129491201 CDS
T10134
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04360
Axon guidance
ssyn04724
Glutamatergic synapse
ssyn04726
Serotonergic synapse
ssyn04929
GnRH secretion
ssyn04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
129491201 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
129491201 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
129491201 (TRPC1)
04726 Serotonergic synapse
129491201 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
129491201 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129491201 (TRPC1)
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129491201 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
129491201
NCBI-ProteinID:
XP_055151134
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Position
10:complement(95828658..95914349)
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AA seq
793 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDY
YMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAIDS
EVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLK
QDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFEL
SADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGL
LEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIF
WPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPAL
ERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKF
HDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKF
LGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFS
LAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEW
RNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLG
FRTSKYAMFYPRN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctctcgggcgcctcctcctcctccctgcct
tcctctccatcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggaggtg
aaggaggagaatacgctgaatgagaagcttttcttgctggcgtgcgacaagggtgactat
tatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgta
gatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatatactg
cagcttcttttggactacggttgtcagtctgcagatgcacttttggtggcaatcgactct
gaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaagacca
actatagtaaaactaatggaacgaattcagaatcctgagtattcaacgactatggatgtt
gcgcctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctcttaaaa
caggatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgttctgca
aaaaacaaaaaggatagcctccgacattccaggtttcgtcttgatatatatcgatgtttg
gccagtccagctctaataatgttaacagaggaggatcctattctgagagcatttgaactt
agtgctgatttaaaagaactaagtcttgtggaggtggaattcaggaatgattatgaggaa
ctagcccggcaatgtaaaatgtttgctaaggatttactcgcgcaagcccggaattcccgt
gaattggaagttattctaaaccatacatctagtgacgagcctcttgacaaacggggatta
ttagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaaagag
tttgtctcccagtctaactgccagcagttcctgaacactgtttggtttggacagatgtca
ggttaccgacgcaagcccacctgtaagaagataatgactgttttgacagtaggcatcttt
tggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatcatt
catacaccttttatgaaatttatcattcatggagcatcatatttcacattcctgctgttg
cttaatctatactctcttgtctacaatgaggataagaaaaacacaatggggccagccctt
gaaagaatagactatcttcttatactgtggattattgggatgatttggtcagacattaaa
agactctggtatgaagggttggaagactttttagaagaatctcgtaatcaactcagtttt
gtcatgaattctctttatttggcaacctttgccctcaaagtggttgctcacaacaagttt
catgattttgctgatcggaaggattgggatgcattccatcctacactggtggcagaaggg
ctttttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaaccagc
tctatcttgggtccattacagatttcaatgggacagatgttgcaagattttggaaaattt
cttgggatgtttcttcttgttttgttttctttcacaattggactgacacaactgtatgat
aaaggatatacttcaaaggagcagaaggactgtgtaggcatcttctgtgaacagcaaagc
aatgataccttccattcgttcattggcacctgctttgctttgttctggtatattttctcc
ttagcgcatgtggcaatctttgtcacaagatttagctatggagaagaactgcagtccttt
gtgggagctgtcattgttggtacatacaatgtcgtggttgtgattgtgcttaccaaactg
ctggtggcaatgcttcataaaagctttcagttgatagcaaatcatgaagacaaagaatgg
aagtttgctcgagcgaagttatggcttagctactttgatgacaaatgtacattacctcca
cctttcaacatcattccctcaccaaagactatctgctatatgattagtagcctcagtaaa
tggatttgctctcatacatcaaaaggcaaggtcaaacggcaaaacagtttaaaggaatgg
agaaatttgaaacagaagagagatgaaaactatcaaaaagtgatgtgctgcctagtgcat
cgttacttgacttccatgagacagaagatgcaaagtacagatcaggcaactgtggaaaat
ctaaacgaactgcgtcaagatctgtcaaaattccgaaatgaaataagggatttacttggc
tttcggacttctaaatatgctatgttttatccaagaaattaa
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