Symphalangus syndactylus (siamang): 129491906
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Entry
129491906 CDS
T10134
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04137
Mitophagy - animal
ssyn04140
Autophagy - animal
ssyn05014
Amyotrophic lateral sclerosis
ssyn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129491906 (OPTN)
04137 Mitophagy - animal
129491906 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129491906 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
129491906 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129491906 (OPTN)
Membrane trafficking [BR:
ssyn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129491906 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129491906 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129491906 (OPTN)
Xenophagy
Cargo receptors
129491906 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
129491906
NCBI-ProteinID:
XP_055152583
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Position
10:complement(19328747..19366658)
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AA seq
578 aa
AA seq
DB search
MSHQPLSCLTEKGDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSEK
SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
IRMAEGEAEGSLKEIKHSPGPTRTVSSGTALSKYRSRSAEGAKNYLEHEELTVSQLLLCL
REGNQKVERLEIALKEAKERVLDFEKKASNRSEIETQTEGSTEKENDEEKGPETVGSEVE
ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYTNKK
LELQVESMLSEIKMEQAKTEDEKSKLAVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTVLRAQMEVYCSDFHAERA
AREKIHEQKEQLALQLAVLLKENDAFEDGGSRQSLMEMQSRHGARTGDPDQQAYLVQRGA
EDWDRRTQLNIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcaacctctcagctgcctcactgaaaagggggacagccccagtgaaagcaca
ggaaatggacccccacatctggcccacccaaacctggacacgttcaccccggaggagctg
ctgcagcagatgaaagagctcctgaccgagaaccaccagctgaaagaagccatgaagcta
aataatcaagccatgaaagggagatttgaggagctttcggcctggacagagaaacagaag
gaagaacgccagttttttgagatacagagcaaagaagccaaagagcgtctaatggccttg
agtcatgagaatgagaaactgaaggaagagcttggaaaactaaaagggaaatcagaaaag
tcatctgaggaccccactgatgactccaggcttcccagggcagaagcggagcaggaaaag
gaccagctaaggacccaggtggtgaggctacaagcagagaaggcagacctgttgggcatc
gtatctgaactgcagctcaagctgaactccagcggctcctcagaagattcctttgttgaa
attaggatggctgaaggagaagcagaagggtcactaaaagaaatcaagcatagtcctggg
cccacaagaacagtctccagtggcacggcattgtctaaatataggagcagatctgcagag
ggggccaagaattacttggaacatgaggagttaactgtgagccagctcctgctgtgccta
agggaagggaatcagaaggtggagagacttgaaattgcactcaaggaggccaaagaaaga
gttttagattttgaaaagaaagcaagtaatcgttctgagattgaaacccagacagagggg
agcacagagaaagagaatgatgaagagaaaggcccggagactgttggaagcgaagtggaa
gcactgaaccttcaggtgacatctctgtttaaggagcttcaagaggctcatacaaaactc
agcgaagctgagctaatgaagaagagacttcaagaaaagtgtcaggcccttgaaaggaaa
aattctgcaactccatcagagttgaatgaaaagcaagagcttgtttatactaacaaaaag
ttagagctacaagtggaaagcatgctatcagaaatcaaaatggaacaggctaaaacagag
gatgaaaagtccaaattagctgtgctacagatgacacacaacaagcttcttcaagaacat
aataatgcattgaaaacaattgaggaactaacaagaaaagagtcagaaaaagtggacagg
gcagtgctgaaggaactgagtgaaaaactggaactggcagagaaggctctggcttccaaa
cagctgcaaatggatgaaatgaagcaaaccattgccaagcaggaggaggacctggaaacc
atgaccgtcctcagggctcagatggaagtttactgttctgattttcatgctgaaagagca
gcgagagaaaaaattcatgagcaaaaggagcaactggcattgcagctggcagttctgctg
aaagagaatgatgctttcgaagacggaggcagcaggcagtccttgatggagatgcagagt
cgtcacggggcgagaacaggtgaccctgaccagcaggcttaccttgttcagagaggagct
gaggactgggaccggcggacacagctgaatattccgattcattcctgccccaagtgtgga
gaggttctgcctgacatagacacgttacagattcacgtgatggattgcatcatttaa
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integrated database retrieval system
