Symphalangus syndactylus (siamang): 129492004
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Entry
129492004 CDS
T10134
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X5
KO
K24356
collagen type XXV alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129492004 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssyn00536
]
129492004 (COL25A1)
Glycosaminoglycan binding proteins [BR:
ssyn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129492004 (COL25A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129492004
NCBI-ProteinID:
XP_055152743
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Position
10:29078398..29592576
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AA seq
654 aa
AA seq
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MLLKKHAGKGGGREPGSEDPSPAEQYCARTMPPCAVMAALLSVVAVVSCLYLGVKTNDLQ
ARIAALESAKGAPSIHLLPDTLDHLKAMVQEKVERLLAQKSYEHMAKIRIAREASSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDTGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDHGDKGDSGSQGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGIQGPKGEQGSPGIPGMDGEQGL
KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagaagcacgcagggaaaggagggggccgggagcccggatccgaggacccg
agccctgccgaacagtattgtgcccggaccatgcccccgtgcgccgtcatggcggccctc
ctgtcagtggtggccgtggtgtcttgcctgtacctgggtgtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaaggggccccctccattcatctgctgcctgat
accctggatcacctcaaggctatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcatcttcagaatgtaactgc
ccagcaggccctccagggaaacgaggtaagagaggccgaagaggagaatctggtcctcct
ggtcagcctggtcctcagggccctcctggtccaaaaggcgataagggagaacaaggtgat
cagggacctaggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggcagggcctccaggaccccct
ggccctccaggaccaagagggccacctggggacacagggaaagatggcccccgtggaatg
ccaggagtacccggtgaaccaggaaaaccaggagaacaaggcttgatgggtcctctaggg
cctccgggacaaaagggttctattggagcacctggaattccagggatgaatgggcaaaag
ggtgagcccgggttgcctggagcagtaggacagaatggaataccaggaccaaagggagaa
cctggagaacaaggtgaaaagggagacactggagagaacggccccaaaggtgacacaggc
gaaaagggtgaccctggatcatctgctgcaggaattaagggagaacctggggaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccaggtttaccaggaaca
aaaggtgaacggggggaagcagggcctcctggaagaggtgagcgaggggaacctggagcc
cccggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggg
gatcatggagacaaaggggactccggatctcagggaccaaggggtccacctggtcaaaaa
ggggatcaaggagccactgagatcatagattacaacggcaacctccacgaagccttacag
aggattaccaccttaactgtcacgggtccccctggacctcctggacctcaaggaatacaa
gggccaaagggagagcaaggatctccaggaatcccaggaatggatggagagcagggactc
aaaggctcaaagggagacatgggggacccaggtatgacaggtgaaaaaggaggaattgga
cttcctggattaccgggagccaatggaatgaaaggagaaaaaggagattctggaatgccg
ggtccacagggtccttctatcataggcccaccaggcccaccaggtccccatggcccacct
ggccccatgggacctcatggacttcctggaccaaagggtacagatggtcctatgggaccc
catggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctgga
ccaagagggccctatgggctgcctgggaaagatggagagcctggtcttgatggcttccct
ggtccacggggtgagaagggtgatctaggagaaaagggagaaaagggattccgtggcgtt
aagggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaa
ttggggccagatggcttacccatgcctggctgttggcaaaagtga
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