Symphalangus syndactylus (siamang): 129492116
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Entry
129492116 CDS
T10134
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129492116 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129492116 (SMARCAD1)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129492116 (SMARCAD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Pox_D5
Motif
Other DBs
NCBI-GeneID:
129492116
NCBI-ProteinID:
XP_055152963
LinkDB
All DBs
Position
10:complement(43931671..44016939)
Genome browser
AA seq
1026 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDIT
EKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSNTVQEKTFNKDTV
IIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESN
ESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQY
ASQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRP
FNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNG
GGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY
QEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVI
VTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPV
QNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFIL
RRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRK
MANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHI
NNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRL
DGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAE
DRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLL
KTSMGL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggaataagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacactcctgattcagatataact
gaaaaaacagaagattctagtgttccagaaactccagataatgaaagaaaagcaagtata
tcatatttcaaaaatcaaagaggaatacagtatattgatttgtcttctgatagtgaagat
gtcgtttccccaaattgctccaatacagttcaagagaaaacattcaacaaagatacagtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggcacgt
agaaatgatgatatttcagaattggaagacctttcggaattggaagaccttaaagatgct
aaacttcagactttgaaggaactttttccacaaagaagtgacaatgatttacttaagttg
attgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggtgat
gcaggtggtgggcccaggaaaagaaaattatcttcttcttcagagccatatgaggaagat
gaatttaatgatgatcaatctataaaaaagacaagactggatcatggagaggaatcaaat
gagtctgcagaatctagcagtaattgggaaaagcaggaaagcattgtactgaaattgcaa
aaggaatttcccaattttgataaacaggaacttagagaagtactcaaggaacatgaatgg
atgtacacagaagctttagaatctctaaaagtgtttgcagaagaccaagatatgcaatat
gcatcacaaagtgaggttccaaatggaaaagaagtttcttcaagaagtcagaattaccct
aaaaatgcaactaaaacaaaactaaaacagaaattttcaatgaaagcacaaaatggcttt
aacaagaaacgtaaaaaaaatgtatttaatccaaagagagttgttgaagactctgaatat
gattcaggttctgatgtcggtagttcactagatgaggactatagtagtggtgaagaagtg
atggaggatggctataagggtaaaattcttcacttccttcaagatgcttcaattggtgaa
cttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccggccc
tttaatagttgggaggctctgttcacaaagatgtccaaaactaatggcttatcagaagat
ttgatatggcactgtaaaacactgatccaagaaagagatgtagttataaggcttatgaac
aaatgtgaagacatttcaaataaattgaccaaacaagttaccatgcttactggaaatgga
ggtggatggaacatagaacaaccttccattctaaaccaaagtttgtcactcaagccctat
cagaaggttggtttgaattggctggcattggtacataaacatggacttaatggcattttg
gcagatgaaatgggcctaggaaaaactattcaagccattgcatttctggcatacctctat
caggagggtaataatggtcctcatttgatcgttgttccagcttcaactatagataactgg
ttaagggaagttaatttatggtgccctactttgaaggtgctctgttactatggttctcaa
gaagaacgtaaacaaattagatttaacattcatagtagatatgaagattacaatgtaatt
gtgaccacatataactgtgcgatcagcagttctgatgaccgtagtctgtttcgacggctg
aaacttaattacgcaatttttgatgagggccatatgctgaagaatatgggctccattcgc
taccagcatcttatgacaattaatgcaaataaccgtttgctgctcacaggcacacctgta
cagaataatctgttagaactcatgtcgctgttgaattttgttatgccacacatgtttagt
agtagcaccagtgaaatacgaagaatgttttcctctaagacaaaatcagcagatgagcaa
agtatatatgaaaaggagagaatagcacatgcaaaacaaattataaagccatttattctc
agaagagtaaaagaagaggttctcaagcagttacccccaaagaaagatcaaattgagtta
tgtgcaatgtcagagaagcaggagcaactctatttgggtcttttcaacagattgaaaaaa
tctatcaataacttggagaaaaacacagaaatgtgtaatgtcatgatgcagttgaggaaa
atggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaaggaaatg
tctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatctttgaa
gatatggaagttatgacagactttgaactacatgtactttgtaaacagtaccgacacatt
aataactttcagttagacatggacttgattttagattctggaaaatttcgagttttagga
tgcatcttgtctgaattgaaacagaagggtgatagagttgtgttatttagccaatttacc
atgatgctggatatcttagaggttctattaaaacatcatcagcataggtacctcagatta
gatggaaagactcagatttctgaaaggattcatctaattgatgagtttaataccgatatg
gatatctttgtgtttctgctatcaacaaaagctggtggattaggaataaatctgacttca
gcaaatgttgttatacttcacgatattgactgtaatccttataatgacaaacaagcagaa
gatagatgccatagagtaggccagactaaagaagtactagttataaaactaataagccaa
gggacgattgaagaatccatgctaaaaattaaccaacagaaattgaaactagaacaggat
atgactacagtagatgaaggtgatgaagggagtatgccagcagatatagccacattacta
aaaacatcaatgggcctgtga
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