Symphalangus syndactylus (siamang): 129492232
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Entry
129492232 CDS
T10134
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03013
Nucleocytoplasmic transport
ssyn05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129492232 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129492232 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129492232 (NUP54)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129492232 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
129492232
NCBI-ProteinID:
XP_055153248
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All DBs
Position
10:62034770..62071133
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AA seq
558 aa
AA seq
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MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALSAPTL
LGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNKDEDG
LVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVVERSP
NGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVDPIIW
EQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTSV
AKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAPTQFKG
RLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDIK
LVEHGLNETIHIRGGVFS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccctcgggcacctctggtaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacaactacaactgcaggttctgcattcagcttttctgcccccactaac
acaggcactactggactcttcggtggtactcagaacaaaggttttggatttggtactggt
tttggcacaacaacgggaagtagtactggtttgggaaccggactgggatttggaggattt
aatacacaacagcagcagcagcaaactactttaggtggtctcttcagtcagcctacacaa
gctcctacccagtccaaccagctgataaatactgcgagtgctctttctgctccaacgctg
ttgggagatgagagagatgctattttggcaaagtggaatcaactgcaggccttttgggga
acaggaaaagggtatttcaacaataatattccgccagtggaattcacacaagaaaatccc
ttttgccgatttaaggcagtaggttatagttgcatgcccagtaataaagatgaagatggg
ctagtggttttagttttcaacaaaaaagaaacagagattcgaagccaacaacaacagttg
gtagaatcattgcataaagttttgggaggaaaccagacccttactgtaaatgtagagggc
actaaaacattgccagatgatcagacagaagttgttatttatgttgttgagcgttcgcca
aatggtacttcaagaagggttccagctacaacgctatatgcccattttgaacaagccaat
ataaaaacacaattgcagcaacttggtgtaaccctttctatgactagaacagaactttct
cctgcacagatcaaacagcttttacagaatcctcctgctggtgttgatcctattatctgg
gaacaggccaaggtagataaccctgattctgaaaagttaattcccgtaccaatggtgggt
tttaaggaacttctccgaagactgaaggttcaagatcagatgactaagcagcatcaaacc
agattagatatcatatctgaagatattagtgagctacaaaagaatcaaactacatctgta
gccaaaattgcacaatacaagaggaaactcatggatctttcccatagaactttacaggtc
ctaatcaaacaggaaattcaaaggaagagtggttatgccattcaggctgatgaagagcag
ttgcgagttcagctggatacgattcagggtgaactaaatgcacctactcagttcaagggc
cgactaaatgaattgatgtctcaaatcaggatgcagaatcattttggagcagtcagatct
gaagaaaggtattacatagatgcagatctgttacgagaaatcaagcagcatttgaaacaa
caacaggaaggccttagccatttgattagcatcattaaagatgatctagaagatataaag
ctggttgaacatggattgaatgaaaccatccacatcagaggtggtgtctttagttga
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