Symphalangus syndactylus (siamang): 129492930
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Entry
129492930 CDS
T10134
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X2
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129492930 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssyn03009
]
129492930 (UTP4)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129492930 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_WDR5
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_Vps41
EIF3I
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_BBS7
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
PROPPIN
PQQ_2
CPSF_A
Motif
Other DBs
NCBI-GeneID:
129492930
NCBI-ProteinID:
XP_055154403
LinkDB
All DBs
Position
11:complement(24492577..24531429)
Genome browser
AA seq
670 aa
AA seq
DB search
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVGC
EDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHTAAGSIDYISVFDVKSGSTVH
KMIVDRQYMGVSKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLIANADVQ
SIAVADQEDSFVVGTAEGTVFHFQLVPVTSNSSEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHFAHHLELWRLGSTVATGKNGDTLPLS
KNADHLLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHDNISLKRVSKMPAF
LRSALQILFSEDSTKLFVASNQGALHIVQLSGGSFKHLHAFQPQSGTVEAMCLLAVSPDG
NWLAASGTSAGVHVYNVKQLKLHCTVPAYNFPVTAMAVAPNTNNLVIAHSDQQVFEYSIP
DKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDKSLPLPND
KTLLYNPFPPTNESDVVRRRTAHAFKISKIYKPLLFMDLLDERTLVAVERPLDDIIAQLP
PPIKKKKFGT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcaggaatccgc
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgggctactgaagctctgtgctgggcagaaggacagcgactctttagtgctgggctcaat
ggtgagattatggagtatgatttacaggcgttaaacatcaagtatgctatggatgccttt
ggaggacctatttggagcatggctgccagccccagtggctctcaacttctggttggctgt
gaagatggatctgtgaaactatttcaaattaccccagacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcatccctctggtacccacact
gcagctggttccatagactacattagtgtgtttgatgtcaaatcaggcagcactgttcat
aagatgattgtggacaggcagtatatgggcgtgtctaagcggaagtgcatcgtgtggggt
gtcgccttcttgtccgacggcactgtcataagtgtggactctgctgggaaggtgcagttc
tgggactcagccactgggacacttgtgaagagccatctcatcgctaatgctgatgtacag
tccattgctgtagctgaccaagaagacagtttcgtggtgggcacagccgagggaacagtc
ttccattttcagctggtccctgtgacatctaacagcagtgagaagcagtgggtgcggaca
aaaccgttccagcatcacactcacgacgtgcgcactgtggcccacagcccaacagcgctg
atatctggagggactgacacccacttagtcattcgtcctctcatggagaaggtggaggta
aagaattacgatgccgctctccgaaaaatcacctttccccactttgctcatcacttggaa
ctttggcgactgggatccacagttgcaacaggcaagaatggagatactcttccactctct
aaaaatgcagatcatttactgcacctaaagacaaagggtcctgagaacattatctgtagc
tgtatctccccatgtggaagttggatagcctattctacagtttctcggttttttctctat
cggctgaattatgaacacgacaacataagcctcaaaagggtttccaaaatgccagcattc
cttcgctctgcccttcagattttgttttctgaagattcaacaaagctctttgtagcatca
aatcaaggagctctgcatattgttcagctgtcaggaggaagcttcaagcacctgcatgct
ttccagcctcagtcaggaacagtggaggccatgtgtcttttggcagtcagtccagatggg
aattggctagctgcatcaggtaccagtgctggagtccatgtctacaatgtaaaacagcta
aagcttcactgcacggtgcctgcttacaatttcccagtgactgctatggccgttgccccc
aataccaacaaccttgtcatcgctcattcggaccagcaggtatttgagtacagcatccca
gacaaacagtatacagattggagccggactgtccagaagcagggctttcaccacctttgg
ctccaaagggatactcctatcacacacatcagttttcatcccaagagaccgatgcacatc
cttctccatgatgcctacatgttctgcatcattgacaagtcattgccccttccaaatgac
aaaaccttactctacaatccatttcctcccacgaatgaatcagatgtcgtccggaggcgc
acagctcatgcttttaaaatttctaagatatataagcctctactcttcatggatcttttg
gatgaaagaacactcgtggcagtagaacggcctctggatgacatcattgctcagctccca
ccacccattaaaaagaagaaatttggaacctaa
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