Symphalangus syndactylus (siamang): 129493024
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Entry
129493024 CDS
T10134
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129493024 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
129493024 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129493024
NCBI-ProteinID:
XP_055154614
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Position
11:complement(25822153..25833635)
Genome browser
AA seq
1437 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TSKTGLRTMPPINLQEKQVICLSGDDSSTCVGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDNLGADGTHGTGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSAAHSSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGSGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCSN
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQERILEAGSTTWHRDGGSILG
LGRSTRPAPGLFLSYGTERRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIR
DEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAAD
TLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQ
EAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEVQHQLHVAVGSLQESILAQVQRIVK
GEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQA
LTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAV
MHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatggacttctggtcccagaccctctctgctcaggtgatggtacctca
acaagcaagactggtcttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcgttgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctctgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggctttcgcgcacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaggagatcttggtccat
atccggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atccctgaggagagcgaggactgctgtgaggagagcagcccaacagtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacctggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagccctctctcctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggagattccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacagtatcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctgtatgtgatggagctgctgcaaaaccag
gaggagggccatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctacggcacactgaggtgctgcctgcc
gaagaggaaaatgacaacttgggtgctgatggtacccatggaaccggtgccatggagtct
gcggccggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgtttccagccacagctgaaccctgatgtggtggccccactgcccacccacactgcc
cacgaggactttacatttggagagtctcggcctgaactgggctccgagggcctggggtca
gccgctcacagctcccagcctgacctccgacgaatcgtggagctgcctgcacccgccgac
ttcctcagcctgagcagtgagaccaagcccaagttgatgacacctgatgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagcggtagcagc
agcagcagcagcagtagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgaccttgagccccaagctgcag
ctggatggcagcctgacaatgagcagcagtggcagccttcaggcaagcccgcgtggcctc
ctgcctggcctgctcccagccccagctgacaaactgactcccaaggggtcgggccaggtg
cctactgccgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcgtctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcggcactgcacctgctgtcc
ccacggccccggccagggcccgagctcggcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctcg
actcctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcaac
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagccaggatgccagtgctgagcaaagtgac
catgatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaagaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagag
ctagcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtactcaactcgaa
ggcctgcagagcacagtcacaggccacgtagaacgtgcccttgagacccggcatgagcag
gaacgtatccttgaggctggtagcacaacatggcatagagacgggggcagcattcttggc
ctgggaaggagtacacgacctgctccaggcctgttccttagctatggcacagagcggcgg
ctggagcgagcactggctgaggggcagcagcggggagggcagctgcaggagcagctgaca
caacagttgtcccaagcactgtcttcagctgtagctgggcggctagagcgcagcatacgg
gatgagatcaagaagacagtccctccatgtgtctcaaggagtctggagcctatggcaggc
caactgagcaactcagtggctaccaagctcacagctgtggagggcagcatgaaagagaac
atctccaagctgctcaagtccaagaacttgactgatgccatcgcccgagcagctgcagac
acattacaggggccaatgcaggctgcctaccgggaagccttccagagtgtggtgctgccg
gcctttgagaagagctgccaggccatgttccagcaaatcaatgatagcttccggctgggg
acacaggaatacttgcagcagctagaaagccacatgaagagccggaaggcacgagaacag
gaggccagggagcctgtgctggcccagctgcggggcctggtcagcacactacagagtgcc
actgagcagatggcagccaccgtggccagcagtgttcgggctgaggtgcagcaccagctg
catgtggctgtgggcagcctgcaggagtccattttagcacaggtacagcgcatcgttaag
ggtgaggtgagtgtggcgctcaaggagcagcaggccgccgtcacctccagcatcatgcag
gccatgcgctcagctgctggcacacctgtcccctctgcccaccttgactgccaggcccag
caagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttccagcaggcg
ctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggacccagcccag
gtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctcatccagcag
ctggcatctgaccttggcactcgaactgacctcaagctcagctacctggaagaggccgtg
atgcacctggaccacagtgaccccatcactcgggaccacatgggctccgttatggcccag
gtgcgccaaaagctttttcagttcctgcaggctgagccacacaactcacttggcaaagca
gcccggcgtctcagcctcatgctgcatggcctcgtgacccccagcctcccttag
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