Symphalangus syndactylus (siamang): 129493227
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Entry
129493227 CDS
T10134
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X3
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129493227 (TNRC6A)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129493227 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
M_domain
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129493227
NCBI-ProteinID:
XP_055155117
LinkDB
All DBs
Position
11:complement(58956624..59175182)
Genome browser
AA seq
1972 aa
AA seq
DB search
MQLVAEPGLDARCPGSQDIPLPEEWNRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQ
KIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQPQQQPQQQQQQQ
QQPQQQPPQQQPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLN
SQSESSALTNQQPQNNGEVQNSKNQSDINHSTSGSHYENPQRGPVSSTSDSSTNCKNAVV
SDLSEKEAWPSVPGSDLELASECMDADSASSSESEKNITIMASGNTGGEKDGLRNSTGLG
SQNKFVVGSSSNNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSS
SSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGCGSSGINIQCSTIGQMPNNQSINSK
VSGGSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSSSV
QNNELPSSNTGAWRVSTMNHPQMQAPSGMNGTSLSHLSNGESKSGGSYGTTWGAYGSNYS
GDKCSGPNGQANGDTVNATLMQPGVNGPMGTNFQVNTNKGGGVWESGAANSQSTSWGSGN
GANSGGSRRGWGTPAQNTGTNLPSVEWNKLPSNQHSNDSANGNGKTFTNGWKSTEEEDQG
SATSQTNEQSSVWAKTGGTVESDGSTESTGCLEEKGTGESQSRDRRKIDQHTLLQSIVNR
TDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKT
SPNSNDTSSVSGWGDPKPALRWGDSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKAAWN
DSQKNKQGWGDGQKSSQGWSVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNEL
GKTSSFTWGNNINPNNSSGWDESSKPTPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQ
DIVGSWGIPPATGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGD
PSKYNYKNVNMWNKNVPNGNSRSDQQAQVHQLLTPASAISNKEASSGSGWGEPWGEPSTP
ATTVDNGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDD
MPLPGNRPTGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMM
KGGNKQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGD
YNRTVGKGPGSRPQISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQ
ALGSIAGLGMQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPL
LSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQR
SVPSGNRPQQDQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQPLHQPVMKSFLDNV
MPHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSL
DQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPP
EFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPST
SAWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAP
SRPPPGLTGQKPPLSTWDNSPLRIGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTP
QIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEF
ASEEEISRFFAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNC
GDLHGTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagtggcagagccaggcctagacgccaggtgtcctggctctcaagacattccg
ctgcccgaggaatggaacagggatttagtgcaagaagaagaacagttgatggaagaaaag
aaaaagaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaaggccactgaacaa
aaaatcaaagtgccagaacagataaagcccagtgtaagccagcctcagcctgccaactct
aataacggcacttccacagcaaccagcactaataataatgccaagcgagctacagccaac
aatcagcagccacagcagcagcagccacagcagcagccacagcagcagcagcaacaacag
cagcagccgcagcagcagccgccgcagcagcagccacagcagcagccacaggccttgcct
cggtatcctcgtgaagtacctccacgatttcgccaccaggaacacaaacagcttctaaag
aggggtcagcattttcctgttatagcagcaaaccttggatctgctgttaaagtgttaaac
agccagtcagaaagcagtgctttaacaaatcaacagccacaaaataacggagaggtgcag
aacagcaaaaaccagtcagatataaaccacagtacttcaggatcccattatgaaaatccc
cagcggggacctgtgtcttctacaagtgattctagcacaaactgtaagaatgctgttgta
agtgacttgtcggaaaaagaagcatggccctcagtccctggcagtgatctggagttggct
tcagaatgtatggatgctgattctgcctccagttctgaatcagaaaaaaacatcactatc
atggcttcagggaacacaggtggtgaaaaagatggccttcggaatagcactggacttggt
tcccaaaacaagtttgtagttggtagcagcagcaataatgtgggccacggaagcagtact
gggccatggggtttttcccatggagccataataagcacatgtcaggtctctgtggatgct
cctgaaagcaaatctgaaagtagcaacaatagaatgaatgcttggggcactgtaagttct
tcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctgg
ccagtattagagaacaatggacttgccctaaaagggcctgtagggtgtggtagttctggc
attaatattcagtgcagtactataggccagatgcctaacaatcagagtattaactctaaa
gtgagtggtggttctacccatggtacctggggaagccttcaggaaacttgtgaatctgaa
gtaagtggtacacagaaggtttcattcagtggtcaacctcaaaatattaccactgaaatg
actggaccaaataacactactaactttatgacctctagtttaccaaactccagttcagtg
cagaataatgagctgcctagtagtaatacaggggcctggcgtgtgagcacaatgaatcat
cctcagatgcaggctccatcaggtatgaatggcacttccctttctcaccttagcaatgga
gagtcaaaaagtggaggctcttatggtactacatggggtgcctatggttctaattactct
ggagacaaatgttcaggccctaatggccaagctaatggtgacactgtgaatgcaactcta
atgcagcctggcgtaaatggtcctatgggcactaactttcaagttaacacaaacaaagga
ggtggtgtgtgggaatctggtgcagcaaactcccagagtacatcatggggaagtggaaat
ggcgcaaattctggaggaagtcgaagaggatggggaactcctgcacaaaacactggcact
aatttacccagcgttgagtggaacaaactgcctagcaatcagcattccaatgacagtgca
aatggcaatggtaagacgtttacaaatggatggaaatctactgaggaagaggatcagggt
tctgccacatctcagacaaatgagcaaagcagtgtgtgggccaaaacaggaggtacagta
gagagcgatggtagtacagaaagcactggatgccttgaggaaaaaggaactggggaaagt
cagagtagagacagaagaaaaattgatcagcacacgttactccaaagcattgtaaacaga
actgacttagatccacgtgtcctgtccaactctggttggggacagactcctattaagcag
aatactgcctgggatacagaaacatcacctagaggggaacgaaagactgacaatgggaca
gaggcctggggaagctctgcaacacagacttttaactcaggggcatgtatagataagact
agccctaatagtaatgatacctcatctgtatcagggtggggtgatcccaaacctgctctg
aggtggggagattccaaaggctcaaactgccagggagggtgggaagatgattctgctgct
acaggaatggtcaagagcaatcagtgggggaattgcaaagaggagaaggctgcatggaat
gactcgcaaaagaacaaacagggatggggtgatggacaaaaatcaagccaagggtggtct
gtttctgccagtgataactggggagaaacttcaaggagtaaccattggggtgaggccaat
aagaaatccagctcaggaggtagtgatagtgacaggtccgtttccggttggaacgaactt
ggtaaaactagttcttttacttggggaaacaacataaatccaaataattcatcaggatgg
gatgaatcttctaaacctactccttcccagggatggggagaccctccaaagtctaatcag
tctctaggttggggagattcatcaaagccagtcagttctccagactggaacaagcaacaa
gacattgttggatcttggggaatcccaccagctacaggcaaacctcctggtacaggctgg
ctggggggacctataccagccccagcaaaagaagaagaacccacaggctgggaggaacca
tccccagaatctatacgtcgcaaaatggagattgatgatggaacttcagcttggggagat
ccaagcaaatacaactacaaaaatgtgaacatgtggaacaaaaacgtcccaaatggcaac
agccgttcagaccagcaagcacaggtacatcagctgctaacgcctgcaagtgccatctca
aacaaagaggcaagcagtggctctggctggggtgagccctggggggagccttctactcca
gccacaactgtggataatggtacttcagcatggggtaagcccatagacagtggtcccagc
tggggggaacccattgctgcggcatccagcacatccacgtggggctccagctctgttggt
ccacaagcattaagcaaatctgggccaaaatctatgcaagatggctggtgtggtgatgat
atgccattgcctggaaatcgccccactggctgggaagaggaagaggatgtagagattgga
atgtggaatagtaattcatctcaagagcttaactcatctttaaattggccaccatataca
aagaaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatg
aaaggtggaaacaaacaagaagaagcgtggataaatccatttgttaaacagttttcaaat
atcagtttttcgagagactcaccagaggaaaatgtacaaagcaataagatggacctttct
ggaggaatgttacaagacaaacgaatggagatagataaacatagcctaaatattggtgat
tacaatcgaacggtcgggaaaggccctggttctcggcctcagatttccaaagagtcttcc
atggagcgcaatccttattttgataaggatggcattgtagcagatgaatcccaaaacatg
cagtttatgtccagtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccag
gcccttggctccatagcagggctgggtatgcaaaacttgaattctgttagacagaatggc
aatcccagtatgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcct
ccagcacaacctcttagttcatctcagcctaatctccgtgctcaagtgcctcctccatta
ctctcccctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaat
ccactctttggccctcaacaggtagccatgctgaaccagctatcccagctaaaccagctt
tctcagatctcccagttacagcgattgttagcgcagcagcaaagggcgcagagccagaga
agcgtgccttctgggaaccggccgcagcaagaccagcagggtcgacctcttagcgtgcag
cagcaaatgatgcaacaatctcgtcaacttgatccaaacctgttggtgaagcagcagact
ccaccatctcagcagcagccactccatcagccagtcatgaagtctttccttgacaatgtc
atgccccacactacacctgagctgcaaaaagggccatcaccaataaatgctttcagcaac
ttccctataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagag
ccacagtcaagactaaggaagtggacgacagtggacagcatttctgtgaacacatctttg
gatcaaaactccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctcca
tttgttccctatgactttatgaacagcagtacttcaccagccagtcctccaggttcaata
ggagatggctggccacgtgccaaatcgcctaacggctctagcagtgttaattggccacca
gaatttcgtcctggtgagccatggaaaggttatccaaacattgaccctgaaactgaccct
tacgtcactcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgac
cacctcagggacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaact
agtgcctggtcatccattcgtgcctccaactacaacgttcccctcagcagtacagcacaa
agcacttcagccagaaatagtgattccaaattgacatggtctcctggttcagttacaaac
acctctctggctcatgagctgtggaaggtccctttgccacctaaaaacatcactgctccg
tcccgcccacctccgggactgactggtcagaagccacccttgtctacgtgggataattct
ccccttcgtataggtggaggatggggaaattctgacgccagatataccccaggttccagc
tggggtgagagcagctcagggagaataacaaattggcttgttctaaaaaaccttacacct
cagatcgatggctcaactctgcgcactctgtgcatgcagcacggcccgctgatcacattc
cacctgaacctccctcacggaaatgctctggtccgctacagttcaaaagaagaggtagtg
aaggcacaaaagtctctgcacatgtgtgtactggggaacactactattcttgctgagttt
gccagtgaagaggagatcagtcgtttctttgcacaaagccagtctctgaccccttctccc
ggctggcagtctctcgggtccagccagagccggctgggctccctcgactgttcccactca
ttctccagccggaccgatctcaatcactggaatggtgctgggctgtcgggaactaactgt
ggagaccttcacggcacttcactctgggggaccccgcattattccacaagcctgtggggt
cctccaagcagcagcgacccccgaggaattagcagcccatctcccattaacgcttttctt
tctgttgaccacctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
