Symphalangus syndactylus (siamang): 129493330
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Entry
129493330 CDS
T10134
Symbol
CDH5
Name
(RefSeq) cadherin-5 isoform X1
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04514
Cell adhesion molecules
ssyn04520
Adherens junction
ssyn04670
Leukocyte transendothelial migration
ssyn05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129493330 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129493330 (CDH5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
129493330 (CDH5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
129493330 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssyn04515
]
129493330 (CDH5)
04090 CD molecules [BR:
ssyn04090
]
129493330 (CDH5)
Cell adhesion molecules [BR:
ssyn04515
]
Cadherins
Major cadherins
129493330 (CDH5)
CD molecules [BR:
ssyn04090
]
Proteins
129493330 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
129493330
NCBI-ProteinID:
XP_055155342
LinkDB
All DBs
Position
11:complement(27365946..27403938)
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AA seq
784 aa
AA seq
DB search
MQRLMMLLTTSGACLGLLAVATVAVAGANPAQRDTHSLLPTHRRQKRDWIWNQMHIDEEK
NTSLPHHVGKIKSSVSRKNAKYLLKGEFVDKVFRVDAETGDVFAIERLDRENISEYHLTA
VIVDKDTGENLETPSSFTIKVHDVNDNWPVFTHRLFNASVPESSAVGTSVISVTAVDADD
PTVGDHASVMYQILKGKEYFAIDNSGRIVTITKSLDREKQARYEIVVEAQDAQGLRGDSG
TATVLVTLQDINDNFPFFTQTKYTFVVPEDTRVGTSVGSLFVEDPDEPQNRMTKYSILRG
DYQDAFTIETNPTHNEGIIKPTKPLDYEYIQQYSFIVEATDPTIDLRYMSPPAGNRAQVI
INITDVDEPPIFQQPFYHFQLKENQKKPLIGTVLAMDPDAARHSIGYSIRRTSDKGQFFR
VTKKGDIYNEKELDREVYPWYNLTVEAKELDSTGTPTGKESIVQVHIEVLDENDNAPEFA
RPYQPKVCENAAHGQLVLQISAIDKDITPRNVKFKFTLNTENNFTLTDNHDNTANITVKY
GQFDREHTKVHFLPVVISDNGMPSRTGTSTLTVAVCKCNEQGEFTFCEDMAAQVGVSIQA
VVAILLCILTITVITLLIILRRRLRKQAHAHGKSVPEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRRGGAKPLRPALDARPSLYAQVQKPPRHAPGAHGGPGEMAAMIEVKKDEADHDG
DGPPYDTLHIYGYEGSESIAESLSSLGTDSSDSDVDYDFLNDWGPRFKMLAELYGSDPRE
ELLY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctcatgatgctcctcaccacatcaggcgcctgcctgggcctgctggcagtg
gcaacagtggcagtagcaggtgctaaccctgcccaacgggacacccacagcctgctgccc
acacaccggcgccaaaagagagactggatttggaaccagatgcacattgatgaagagaaa
aacacctcactgccccatcatgtaggcaagatcaagtcgagtgtgagtcgcaagaatgcc
aagtacctgctcaaaggagaatttgtggacaaggtcttccgggtcgacgcagagacagga
gacgtgtttgccattgagaggctggaccgggagaacatctcagagtaccacctcactgct
gtgattgtggacaaggacaccggggaaaacctggagacgccttccagcttcaccatcaaa
gtacacgacgtgaacgacaactggcctgtgttcacgcatcggttgttcaatgcatctgtg
cctgagtcatcagctgtggggacctcggtcatctctgtgacagcagtggatgcagacgac
cccactgtgggagaccacgcctctgtcatgtaccaaatcctgaaggggaaagagtatttt
gccatcgataattctggacgtattgtcacaataaccaaaagcttggaccgagagaagcag
gccaggtatgagatcgtggtggaagcgcaagatgcccagggcctccggggggactcgggc
acggccaccgtgctggtcactctgcaagacatcaatgacaacttccccttcttcacccag
accaagtacacatttgtcgtgcctgaagacacccgtgtgggcacctctgtgggctctctg
tttgttgaggacccagatgagccccagaaccggatgaccaagtacagcatcttgcggggc
gactaccaggacgctttcaccattgagacaaatcccacccacaacgagggcatcatcaag
cccacaaagcctctggattatgaatacatccagcaatacagcttcatcgtcgaggccaca
gaccccaccatcgacctccgatacatgagccctcccgcgggaaacagagcccaggtcatt
atcaacatcacagatgtggacgagccccccattttccagcagcctttctaccacttccag
ctgaaggaaaaccagaagaagcctctgatcggcacagtgctggccatggaccccgacgcg
gctaggcatagcattggatactccatccgcaggaccagtgacaagggccaattcttccga
gtcacaaaaaagggggacatttacaatgagaaagaactggacagagaagtctacccctgg
tataacctgactgtggaggccaaagaactggattccactggaacccccacaggaaaagaa
tccattgtgcaagtccacattgaagttttggatgagaatgacaatgccccggagtttgcc
cggccctaccagcccaaagtgtgtgagaacgctgcccatggccagctggtcctgcagatc
tccgcaatagacaaggacataacaccacgaaacgtgaagttcaaattcaccttgaatact
gagaacaactttaccctcacggataatcacgataacacagccaacatcacagtcaagtat
gggcagtttgaccgggagcataccaaggtccacttcctacccgtcgtcatctcagacaat
gggatgccaagccgcacgggcaccagcacgctgaccgtggccgtgtgcaagtgcaacgag
cagggcgagttcaccttctgcgaggatatggccgcccaggtgggcgtgagcatccaggca
gtggtagccatcttactgtgcatcctcaccatcacagtgatcaccctgctcatcatcctg
cggcggcggctccggaagcaggcccacgcgcacggcaagagcgtgccggagatccacgag
cagctggtcacctacgacgaggagggcggcggcgagatggacaccaccagctacgatgtg
tcggtgctcaactcggtgcgccgcggcggggcgaagcccctgcgacccgcgctggacgcc
cggccgtccctctacgcgcaggtgcagaagccaccgcggcacgcgcctggggcacacgga
gggcccggagagatggcagccatgatcgaggtgaagaaggacgaggcggaccatgacggc
gacggccccccctacgacacgctgcacatctacggctacgagggctccgagtccatagcc
gagtccctcagctccctgggcaccgactcatccgattctgacgtggattacgacttcctt
aacgactggggacccaggtttaagatgctggctgagctgtacggctcagacccccgggag
gagctgctgtattag
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