Symphalangus syndactylus (siamang): 134733119
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Entry
134733119 CDS
T10134
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04390
Hippo signaling pathway
ssyn04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
134733119 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
134733119 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
134733119 (SOX2)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134733119 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134733119
NCBI-ProteinID:
XP_063477906
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All DBs
Position
17:83469121..83471637
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AA seq
319 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcaactccaccgcggcggcggccggcggcaaccagaagaacagcccg
gaccgcgtcaagcggcccatgaatgccttcatggtgtggtcccgcgggcagcggcgcaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgag
tggaaacttttgtcggagacggagaagcggccgttcatcgacgaggctaagcggctgcga
gcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacg
ctcatgaagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaacagc
atggcgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggac
agttacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctg
ggctacccgcagcacccgggcctcaacgcgcacggcgcagcgcagatgcagcccatgcac
cgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggctcttggc
tccatgggttcggtggtcaagtccgaggccagctctagcccccctgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtatctc
cccggcgccgaggtgccggaacccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacggccattaacggcacactgcccctctcacacatgtga
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