Symphalangus syndactylus (siamang): 134733158
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Entry
134733158 CDS
T10134
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134733158 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
134733158 (VPS8)
Membrane trafficking [BR:
ssyn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134733158 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf-RING_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
zf-RING_2
Clathrin
zf-RING_5
zf-RING_UBOX
zf-C3H2C3
Beta-prop_WDR3_1st
UBA_HOIP
Beta-prop_WDR5
zf-C3HC4
EIF3I
PHD
GED
Motif
Other DBs
NCBI-GeneID:
134733158
NCBI-ProteinID:
XP_063477984
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Position
17:86512891..86750200
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AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCAKMSEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENHLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLKPCKAAELVATHFSGHIEMVIKKLQNQVLLFKFLRSLLDPREGIHINQE
LLQISPCITEQFIELLCQFSPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLERLQSKLQEITHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEIEGQTRWTCYKCSSNNKVGKLSE
NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagatgagcgaa
gaagagctgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttaaaaagaaagaag
aaattacctgattctttttcacttcatggatcagttatgcgccattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatggc
gctatctctgccctcagtatcaacaatgattgctcaagacttctttgtggctttgctaaa
ggacagatcaccatgtgggatttggccagtggaaaacttctaagatcaataacagatgct
catcctccaggaacagcaatattgcatatcaagtttacagatgatccaactcttgcaatt
tgcaacgacagcggaggctctgtttttgaattgacgtttaagagagtgatgggagtgaga
acctgtgaatctagatgtctgttcagtggttccaagggtgaagtctgctgtattgagcct
ctgcattctaagcctgagttgaaagatcatcccatcacacagttttcattattggccatg
gcatccttaacaaaaatactggtcattggattgaaaccatccttgaaagtatggatgact
tttccctacggccggatggatccttccagtgtgccactgctggcctggcactttgtagca
gtgcaaaattatgtgaatcccatgcttgccttctgcagaggcgatgttgttcattttctg
ttggtaaagagagatgaatctggagcaatacatgttactaagcaaaagcatcttcaccta
tactatgacctcatcaactttacttggataaattcacgcacagttgtgctcttagacagc
gtagagaagttgcatgtgattgatcggcaaacacaagaggaattagagacagtggagatc
tcagaagttcagctggtctacaatagcagccatttcaaatcactagccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgcg
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaag
cgaaaggctattgttgcagaccggatggtagaaatcctattccattatgcagatcgagct
ctgaaaaagtgcccagaccaaggaaaaatccaagtgatggagcagcattttcaggatatg
gtgcctgtcatagttgattactgccttctgctgcagcgaaaggatcttttatttagtcag
atgtatgataaattaagtgagaattcagtggccaaaggagtatttttggagtgccttgag
ccatatattttaagtgataaattggtgggaatcacaccccaagtaatgaaagacttgatt
gttcatttccaagataaaaaattaatggaaaatgtggaagctctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcatttatatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaaaacactaacagatgaacaagttgtt
atgggcaataagcttcttgtatatattagctgttgtctagcaggtcgtgcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctaatt
cgcctgcattcagcagaggcttctcctgaggaagaaatctatccttacattcggactttg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtggaatatcaacagcgaattgtggatattttgttgaaagttatg
gtggagaattcagactttaccccctcacaagtaggatgtctctttaccttccttgctcgg
cagcttgcaaagcctgacaacaccttgtttgtaaacagaacactttttgatcaggtcctt
gaattcctttgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcaatttgaagagagtcgactcatccggatggca
gaaaaagctgagttctatcaaatttgtgaatttatgtatgaaagagaacaccaatatgac
aaaattatcgattgctacttacgtgaccctctgagagaggaagaagtctttaattacatt
cacaatatcttatccattcctggacacagtgcagaggagaaacagtctgtatggcagaaa
gcaatggatcatattgaggaacttgtgtccctgaagccctgtaaagctgcggagctggtt
gccacccacttttctggacatattgaaatggtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatataaatcaagaa
ttactgcaaatatctccttgtatcacagagcagttcattgagctgttgtgtcagttcagc
ccaacccaagttatagagactctgcaagtccttgagtgctaccgtctggaagaaactatt
cagattactcagaagtatcaacttcatgaagtcactgcttatctattggaaaagaaagga
gatattcatggtgccttcctaataatgttagagaggctacaaagcaaacttcaagagata
acacatcaaggtgaaaataccaaagaggacccctcattgaaggatgttgaagataccatg
gtggagaccattgctctttgccagagaaattcacataatttgaaccagcagcaacgtgag
gcactttggtttccattattggaggcaatgatggcccctcagaagctgtccagttcagcc
attcctcatctacactctgaagctctgaaatctttgaccatgcaagttttaaatagcatg
gcagcttttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttatcttgggaatgttagatacctttaactat
gaacaaaccctgctggaaacaacaactagccttctaaaccaagatctccattggtcattg
tgtaacctgagagcttcggtcaccagaggactgaatcccaaacaagattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaattattgtctttagctgt
ggccatttgtatcactcattctgcctacaaaacaaagaatgcactgtggaaattgagggc
caaacaagatggacatgctacaaatgcagctcaaataacaaagtaggaaaactcagtgaa
aattcatctgaaattaaaaagggaaggataaccccatcacaggtaaaaatgtctccatca
tatcatcagtccaaaggggatcccactgctaaaaaaggaacctcagaacctgttctggat
ccacagcaaatccaagcatttgatcagctttgccgtctctaccgaggaagctccaggctg
gctctcctcacggaactctcccagaatcgcagcagcgagagctataggccattcagtggc
tcgcagagtgctcctgctttcaacagcatcttccagaatgagaatttccagctgcagctc
attcccccacctgtgactgaggattga
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