Spiroplasma syrphidicola: SSYRP_v1c00070
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Entry
SSYRP_v1c00070 CDS
T02677
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssyr
Spiroplasma syrphidicola
Pathway
ssyr03030
DNA replication
ssyr03430
Mismatch repair
ssyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSYRP_v1c00070 (dnaX)
03430 Mismatch repair
SSYRP_v1c00070 (dnaX)
03440 Homologous recombination
SSYRP_v1c00070 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyr03032
]
SSYRP_v1c00070 (dnaX)
03400 DNA repair and recombination proteins [BR:
ssyr03400
]
SSYRP_v1c00070 (dnaX)
Enzymes [BR:
ssyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSYRP_v1c00070 (dnaX)
DNA replication proteins [BR:
ssyr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSYRP_v1c00070 (dnaX)
DNA repair and recombination proteins [BR:
ssyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSYRP_v1c00070 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
Glyco_tranf_2_5
AAA_30
AAA_22
AAA_5
PIF1
TIP49
AAA_14
AAA_24
AAA_19
AAA_assoc_2
AAA_2
AAA_16
Mg_chelatase
AAA_7
Cytidylate_kin
ResIII
Motif
Other DBs
NCBI-GeneID:
16152746
NCBI-ProteinID:
AGM25603
UniProt:
R4U4W8
LinkDB
All DBs
Position
9486..11528
Genome browser
AA seq
680 aa
AA seq
DB search
MNYIALYRKYRPNGFDRVIGQTEIKVALQNAISNNSFSHAYLFSGPRGTGKTSIAKIFAK
SINCENLANGAACNNCSNCLEMNQGLAVDVLEIDAASNNGVDEIREIRNNVQLSPTKAKY
KVYIIDEIHMLTNSAFNALLKTLEEPPKHVIFILATTESHKIPATIISRCQQYNFRKISK
NELEHNLINILNREQIKFEELAIKEIALLSDGSARDSLSILEQVVMFSNRNVTLEAVNTI
FATVSKQNKLAILKNIFENNANEVLETSKKLYFAGTDFELLSISLLDILKEIFEFKQTNN
LNFLTTLSKNEAEIFANKLTSQELVNLIDLLTDNLNKMKLAKSQELYFELILLKALSFFE
NNKKDLTELVLSDGIKDVKMEQPEIKEQNIYPENNENIEIYSDNTINQNQGPVQNELFTT
EQQESENRNNVKIEQDDIPMEGLFENSFIAPADPDQFFANDENVQPEISTSENENNIRNA
ELNQTNSGFENNIVGITNLDKYRDDIKKRINIYSLTDINYSVNQILNILVAANKENRQKF
ETFFNELIKTKDKKINFEKLISFYGVKYAAGSDQGLIIVTSTKPEANWISHEMSDWEFRN
KLFEYFDSDFVIIALSENEWSNIKGDYLKLRQANKLPTVTLVDVEEFYQNLLIKQIDDYE
SHKEAIETGKQIFDNIKIID
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatagcattatatcgaaaatatcgtcctaatggctttgatcgtgtaatagga
caaacagaaattaaggttgcattacaaaatgcaattagtaataattccttttcacatgct
tacttattttctggaccacggggaacaggaaaaacatcaattgcaaaaatttttgcaaaa
agtattaattgtgaaaatttggcaaatggagcagcttgtaataactgtagtaactgtctt
gaaatgaatcaaggtcttgctgttgatgttttagaaattgatgcagcttcaaataacggg
gttgatgaaattagagaaattcgaaataacgttcagttatcaccaacaaaagcgaaatac
aaagtttatattatcgatgaaattcatatgctaactaattccgcttttaatgcgctatta
aaaacactagaagaaccaccaaaacatgttatttttattttagcaacaactgaaagtcat
aagattccagcaacaattatttctcgttgtcagcaatataattttcgaaaaatatcaaaa
aatgagttagaacataatttaattaatattttaaatcgtgaacaaattaaatttgaagaa
ttagcaattaaagaaattgctttattatcagatggtagtgctagagactcattgagtatt
ttagaacaagttgtaatgttttcaaaccgcaatgttacattagaggcagttaatactatt
tttgcaacagtgtcaaaacaaaataaattagccattttaaaaaatatttttgaaaataat
gcgaatgaagttttagaaactagcaagaaactttattttgctggaacagattttgaatta
ttatcaatttccctactagatattttaaaagaaatttttgaatttaaacaaacaaataat
cttaactttttaacaaccttatcaaaaaatgaagctgaaatttttgctaataaactaact
tcacaagagctagtaaacttaattgatctattaacagataatttgaataaaatgaaatta
gcaaaatcacaggaactatattttgaattaatcttactaaaagctttatctttttttgaa
aataataagaaagatttgacagagttagttctgtcagatggaattaaagatgttaaaatg
gagcaaccagaaattaaagaacaaaatatatatccagaaaataatgaaaacatagaaata
tattccgataatactattaaccagaaccaaggacctgttcagaatgaattgttcacaaca
gaacaacaagaaagtgaaaacagaaataatgttaaaatagaacaagatgatattccaatg
gaaggattatttgaaaatagttttattgctccagcagatcctgaccagttttttgccaat
gacgaaaatgttcaaccagaaatctcaactagtgaaaatgaaaacaatattagaaatgca
gaattgaatcaaacaaatagtggttttgaaaataatattgttgggataacaaatcttgat
aagtatcgtgatgatattaagaaacgaattaatatttatagtttaactgatattaattat
tcagttaatcaaattttaaatattttagtagctgccaataaagaaaaccgacaaaaattt
gaaactttctttaatgaattaattaaaacaaaagataaaaaaattaactttgaaaaatta
attagtttctatggtgttaaatatgctgcaggatctgaccaaggattaattattgttaca
agtacaaaaccagaagcaaattgaattagccatgaaatgagtgactgagaatttagaaat
aaattatttgaatactttgattctgattttgttattattgctttaagcgaaaatgaatga
tcaaacatcaagggagattatttaaaattgcgacaagcaaataaattaccaacagtaacg
ttagttgatgtggaagagttttaccaaaatttattaattaaacaaattgatgactatgaa
agtcacaaagaagctattgaaacaggaaaacaaatttttgataatattaaaattatcgat
taa
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