Spiroplasma syrphidicola: SSYRP_v1c01880
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Entry
SSYRP_v1c01880 CDS
T02677
Symbol
yabC
Name
(GenBank) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssyr03009
]
SSYRP_v1c01880 (yabC)
Enzymes [BR:
ssyr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SSYRP_v1c01880 (yabC)
Ribosome biogenesis [BR:
ssyr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SSYRP_v1c01880 (yabC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
DUF434
Motif
Other DBs
NCBI-GeneID:
16153209
NCBI-ProteinID:
AGM25784
UniProt:
R4UD05
LinkDB
All DBs
Position
210897..211808
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AA seq
303 aa
AA seq
DB search
MANRVKQYSFKSTLPTVYLVATPIGNLGEMTPRAVDVLTNQVAKIYCEDTRNTLKLLNHF
GIHKELISLNKDNEKERYTKIAGDLANNLSIAIVSDAGYPLISDPGYYIINNLIADQNCN
IVPVSGANAALNALVASGLNPTHFLFYGFLAAQGVKKKEQLASLHEFPYTTIFYESPHRL
LATLALIEQQWGNRLCCVVKELTKIHEQFYRGPITELLTILPTEANLEQGEYVIVVAGYD
LATNKARPGDFELVEEVDFLIKNNNYRIKQAIDIIANKYDISKNILYNMYHKSIGDEDNE
TKS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagggttaaacaatatagttttaaaagtacattaccaactgtttatttagtg
gcgaccccaattggaaacttaggggaaatgacaccgcgggctgttgatgttttaacaaat
caagtggcaaaaatttattgtgaagatacgcgcaataccctaaagctcttaaaccatttt
gggattcataaggaattaatttcattaaataaagataatgaaaaagaacgttatacgaag
attgccggggatttagctaataatctttcaattgccattgttagtgatgctggttatcca
ttaattagtgatcctggctattatattatcaataacttaattgctgatcagaattgtaat
attgtcccggtgtcaggggctaatgcggctttaaatgctttagttgcttcagggttaaat
ccgacccactttttgttttatggttttttagcagcacaaggggttaagaaaaaagaacaa
ttggctagtttacacgaatttccatacacaacgattttttatgaaagtccgcaccggcta
ttggcaactttagcattaattgagcaacaatgaggtaatcggttgtgttgtgttgtcaaa
gaattaacgaaaattcatgagcagttttatcgcggaccaattactgaattattaacaatc
ttaccaacagaagcaaatcttgaacaaggggaatatgttattgttgtagcgggttatgat
ttagcaactaataaagctaggccaggagatttcgaacttgtcgaggaagttgatttttta
atcaaaaataataattatcgaattaagcaagcaattgatattattgcaaataaatatgat
attagtaaaaatattttatataatatgtatcataaaagtataggtgatgaagacaatgaa
acaaaaagctaa
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