Spiroplasma syrphidicola: SSYRP_v1c02060
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Entry
SSYRP_v1c02060 CDS
T02677
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssyr03016
]
SSYRP_v1c02060 (truA)
Enzymes [BR:
ssyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SSYRP_v1c02060 (truA)
Transfer RNA biogenesis [BR:
ssyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SSYRP_v1c02060 (truA)
Prokaryotic type
SSYRP_v1c02060 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
16152828
NCBI-ProteinID:
AGM25802
UniProt:
R4U340
LinkDB
All DBs
Position
233628..234368
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AA seq
246 aa
AA seq
DB search
MLNLLLTLEYDGFDYKGWIKQKNALTIQGELEKAFFNVCQINLWTLGASKTDAGVHACDQ
KVLVKIPFQPKDLAFFIKTVSYSLPLNINIKNYTVVDENFNVRDTKEKEYIYTINDQDYD
LLNHRYELQTKQQYDEKRLHTIAQIFVGEHDFAFFSGVKRDETIKTIRTINAIDVVRDKN
KKIKIHFKGKGFIRYQIRMIVQNILECYHGRITIATLQEQLANPPVGKTTIFSAKPYGLC
LAKIIY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttactgttaactttagaatatgatggctttgattataaaggttgaattaaa
caaaaaaatgctttaacaattcaaggagaattagaaaaagccttttttaatgtttgccaa
attaacctttgaaccctcggagcaagtaaaactgatgctggtgttcatgcttgtgatcaa
aaagtgttagttaaaattccgtttcaaccaaaagacttagctttttttattaaaactgtc
agctatagtttaccgttgaatattaatattaaaaattatactgttgttgatgaaaatttt
aatgttcgtgatacaaaagaaaaagaatatatttatacaattaatgatcaagattatgat
ctattgaatcatcgttatgaattacaaactaagcaacaatatgatgaaaagcgtcttcat
acaattgcccaaatttttgttggcgaacatgattttgctttttttagtggcgtaaaaagg
gatgaaacaattaagacgatccgaacaatcaatgcaattgatgttgtccgggataagaat
aaaaaaataaaaatccattttaaagggaaaggatttattcgttatcaaattcgaatgatt
gttcagaatattttggagtgttatcatggtcgcattacgattgcaactttgcaagaacag
ttagctaatcccccagttgggaaaacaacaatttttagtgctaagccatatggtttatgt
ttagctaaaattatttattaa
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