Spiroplasma syrphidicola: SSYRP_v1c02950
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Entry
SSYRP_v1c02950 CDS
T02677
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssyr
Spiroplasma syrphidicola
Pathway
ssyr00010
Glycolysis / Gluconeogenesis
ssyr00020
Citrate cycle (TCA cycle)
ssyr00260
Glycine, serine and threonine metabolism
ssyr00280
Valine, leucine and isoleucine degradation
ssyr00620
Pyruvate metabolism
ssyr00630
Glyoxylate and dicarboxylate metabolism
ssyr00640
Propanoate metabolism
ssyr00670
One carbon pool by folate
ssyr00785
Lipoic acid metabolism
ssyr01100
Metabolic pathways
ssyr01110
Biosynthesis of secondary metabolites
ssyr01120
Microbial metabolism in diverse environments
ssyr01200
Carbon metabolism
ssyr01210
2-Oxocarboxylic acid metabolism
ssyr01240
Biosynthesis of cofactors
Module
ssyr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SSYRP_v1c02950 (pdhD)
00020 Citrate cycle (TCA cycle)
SSYRP_v1c02950 (pdhD)
00620 Pyruvate metabolism
SSYRP_v1c02950 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SSYRP_v1c02950 (pdhD)
00640 Propanoate metabolism
SSYRP_v1c02950 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SSYRP_v1c02950 (pdhD)
00280 Valine, leucine and isoleucine degradation
SSYRP_v1c02950 (pdhD)
00310 Lysine degradation
SSYRP_v1c02950 (pdhD)
00380 Tryptophan metabolism
SSYRP_v1c02950 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SSYRP_v1c02950 (pdhD)
00670 One carbon pool by folate
SSYRP_v1c02950 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyr04147
]
SSYRP_v1c02950 (pdhD)
Enzymes [BR:
ssyr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SSYRP_v1c02950 (pdhD)
Exosome [BR:
ssyr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SSYRP_v1c02950 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
GIDA
HI0933_like
FAD_oxidored
FAD_binding_2
NAD_binding_8
Thi4
AlaDh_PNT_C
DAO
3HCDH_N
FAD_binding_3
Lys_Orn_oxgnase
Rep_1B
Motif
Other DBs
NCBI-GeneID:
16153424
NCBI-ProteinID:
AGM25891
UniProt:
R4UKV0
LinkDB
All DBs
Position
315052..316434
Genome browser
AA seq
460 aa
AA seq
DB search
MDKFDVIVVGAGPGGYVCAIKAAQEGLKTMIVEKEYYGGVCLNVGCIPTKALLKSSKVYD
IIQHADTYGIDIGDLGKIAPNWEKMQDRKSKVVNKLTSGVEFLLKKNKVTIVKGTAKALD
KNTIEVDGKKYSCDNLVIATGSTSRMLPLPGFEEGFKAGYVISSTEALKLPKIPKKLAVI
GGGVIGVEFACLYRRLGTEVTILQGLDTILEILDKDVRDEMTKLLIKNKVKIETNVKIKE
IKDKAVHYTNDKGEEVVLKTDYCLVSVGRKPIINGFENIGLNINERQSIVVDDGCRTNLP
GVYAIGDVVGKAMLAHVASVQGLIVVDNIKGRNQKIDYNKIPACIYSYPEVAVVGKTEDE
LIKAKIPYKAFKFPIAANGKALADGETDGFVKIICEPKYGEILGAHMICGTATDMISEIT
TCMEMEGTIYDLGRAITPHPTLSEMIMEAVHGLEGHAIHI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgatgttattgttgttggtgctggtcctggtggatatgtttgtgcaatt
aaagcagcccaagaagggttgaaaacaatgattgtcgaaaaagaatattacggaggagta
tgtctaaacgttggttgtattccaacaaaagcattattaaaaagctcaaaagtttatgac
attattcagcatgctgacacctatggaattgatattggggatttaggtaaaattgcccct
aattgagagaaaatgcaagatcgtaaaagtaaagttgttaataaattaacaagtggggtt
gaatttttattaaagaaaaataaagtcacaattgttaaaggaacagctaaagcgcttgat
aaaaatacaattgaagttgatggtaaaaaatatagttgtgacaacttagttattgcaaca
ggaagtacaagtcgaatgctaccattacctggttttgaagaaggttttaaagctggttat
gttatttcttcaaccgaagctttaaaattaccaaaaattcccaaaaaacttgctgttatt
gggggtggtgtaattggcgttgaatttgcttgtttataccgtcgtttaggaacagaagta
acaattttacaagggttagatacaattttagaaattctggacaaagatgttcgtgatgaa
atgacaaaattattaatcaaaaacaaagttaaaattgaaacaaatgttaaaatcaaagaa
attaaagataaagcagttcattacactaatgataaaggtgaagaagttgttttaaaaaca
gattattgtttagtatctgttggtcgtaaaccaattattaatggttttgaaaatattggg
ctaaatattaatgaacgccaaagtattgttgttgatgatggttgtcgtactaacttacca
ggagtttacgcgattggtgatgttgttgggaaagcaatgttggcccatgttgcctcagtg
caggggttaattgttgttgacaacattaaagggcgtaatcaaaaaattgattataataaa
attccagcttgtatttattcatatccggaagttgccgttgttggaaaaaccgaagatgaa
ttaatcaaagcaaaaattccctacaaagcctttaaattcccaattgccgcaaatggaaaa
gccttagcggatggggaaactgatggatttgttaaaattatttgtgaaccaaaatatggt
gaaattttaggagctcatatgatttgtggaacagccactgacatgatttctgaaattaca
acatgtatggaaatggaaggaacaatttatgatttaggacgggcaattactccccatcca
actttatcagaaatgattatggaagctgtccatggtttagaaggacacgcaattcatatt
taa
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