Spiroplasma syrphidicola: SSYRP_v1c03370
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Entry
SSYRP_v1c03370 CDS
T02677
Symbol
ffh
Name
(GenBank) signal recognition particle
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ssyr
Spiroplasma syrphidicola
Pathway
ssyr02024
Quorum sensing
ssyr03060
Protein export
ssyr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SSYRP_v1c03370 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SSYRP_v1c03370 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SSYRP_v1c03370 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssyr02044
]
SSYRP_v1c03370 (ffh)
Enzymes [BR:
ssyr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SSYRP_v1c03370 (ffh)
Secretion system [BR:
ssyr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SSYRP_v1c03370 (ffh)
Eukaryotic Sec-SRP protein
SSYRP_v1c03370 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
Fe-ADH
ResIII
AAA_17
AAA_33
AAA_19
SHPRH_helical-1st
APS_kinase
NB-ARC
B12-binding
6PF2K
MMR_HSR1
Lip_prot_lig_C
RelE
PDE8A_N
Arf
AAA_30
AAA_24
RMNT_CmcI
AAA_16
cobW
FhbB
HTH_1
NPHP3_N
G-alpha
DUF4175
Motif
Other DBs
NCBI-GeneID:
16153171
NCBI-ProteinID:
AGM25931
UniProt:
R4UKZ3
LinkDB
All DBs
Position
361359..362717
Genome browser
AA seq
452 aa
AA seq
DB search
MIGDFLANRLKKSIEKNLKKSTLTDETVQETLREIRLALLEADVNNAVVKDFIKAVEAKA
KGEYINEGLNASQMMIKIVHEELINIFGKTAYELNLSAKPAVIMMVGLQGSGKTTTTGKI
AKLIEKKYHKKPLLVACDIYRPAAIDQLKTIGQNLGVEVFERGTQNPVLTAQQAVEYAKE
HKHDVVLLDTAGRLHIDENLMQELKEIKNNVSPSEILIVVDGMTGQDIINVASEFNDLLK
LTGVVVTKLDGDARGGAALSITHLTKLPISFIGTGEGMSNLQIFYPDRMADRILGMGDVQ
TLFEKAKDVIDERDMKKTMNRMMMGQFDLQDLLNQMRQISKMGKMGGLMKLIPGMPKVSD
EKIADAERKLKVTEVLLSSMTIKERREPRLLKHLSRKNRIIKGSGRSEKEYNELINQFEK
TKKQVDEIARQIKSGRMPNIPGMGGLGGLGFN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattggagattttttagctaatcgcttgaaaaagtcaattgaaaagaatttaaaaaaa
tcgactttaactgatgaaacagtgcaagaaacgttacgtgaaattcgtttggctttacta
gaagccgatgtaaataatgccgttgtaaaagattttattaaagcagttgaagctaaagca
aaaggagaatatattaacgaaggcttaaatgcttcgcaaatgatgattaaaattgttcat
gaagaattaattaacatttttgggaaaacagcttatgaattaaatctttcagctaaacca
gctgttattatgatggttggattacaagggagtgggaaaacaaccacaactgggaaaatt
gcaaaactaattgaaaaaaaatatcataaaaaaccgttgttagtagcttgtgatatttat
cgtcctgccgcaattgatcagttaaaaacaattgggcaaaatttaggggtagaagttttt
gaacggggaacccaaaatcctgttttaacagcgcaacaagcggtggaatatgccaaagaa
cataaacatgatgttgtcttattagatactgctggtcgtttacatattgatgaaaattta
atgcaagaattaaaagaaattaaaaataatgtttcgccaagtgaaattttaattgttgtt
gatggaatgacaggacaagatattattaatgttgctagtgaatttaatgacttattaaaa
ttaacgggagtagttgtcacaaagttagatggagatgctcgtgggggagctgctttatca
attacccatttaacaaaattaccaattagttttattgggactggggaaggaatgagtaac
ttacaaattttttaccctgaccgaatggctgaccgaattttgggaatgggagatgtccaa
accttatttgaaaaagcaaaagatgtcattgatgaacgggacatgaaaaaaacgatgaac
cgaatgatgatggggcaatttgatttacaagacttgttaaaccaaatgcgccaaatttca
aaaatgggaaaaatggggggattaatgaaattaattccggggatgccaaaagttagtgat
gaaaaaattgctgatgcggaacgtaagttaaaagtaacggaagttttattatcatcaatg
acaattaaggaacgtcgtgaaccacggttattaaaacatttatcacgaaaaaaccgtatt
attaaaggttctggtcgtagtgaaaaagaatataatgaattaattaatcaatttgaaaaa
acaaaaaaacaagttgatgaaattgcccgtcaaattaaatcagggcgaatgccaaatatc
ccaggaatgggtggcttagggggcttaggctttaactaa
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