Spiroplasma syrphidicola: SSYRP_v1c03780
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Entry
SSYRP_v1c03780 CDS
T02677
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssyr03009
]
SSYRP_v1c03780 (rluB)
Enzymes [BR:
ssyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SSYRP_v1c03780 (rluB)
Ribosome biogenesis [BR:
ssyr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SSYRP_v1c03780 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
16153170
NCBI-ProteinID:
AGM25972
UniProt:
R4U3I7
LinkDB
All DBs
Position
409438..410187
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AA seq
249 aa
AA seq
DB search
MERLQKVIANSGYCSRRKAEELIAAGKVTVNGVVISELGTKVGPHDKIAINNKPLQNINR
EKVYIMLNKPRNCVSTMSDPQHRRTVLSYIQGIPQRIYPVGRLDYDTSGLLLLTNDGEFA
NIITHPSHVVNKTYHVLINGAISKTELQQLARGVEIEPGIISSPATAKLLNYADKTNNAV
ISLTIHEGKKHQVKRMIAAVGKEVLKLKRVAISFLELDETLRPGEWRHLKPKEVKRFFGV
GVIAKQKNN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttacaaaaagttattgccaattccggttattgttcgcgccgaaaagcggaa
gagttaattgccgctggaaaagtaacagttaatggggttgtgattagtgagttaggaaca
aaagttggaccccacgataaaattgcaattaataataaaccattgcaaaatattaatcgc
gaaaaagtttatattatgttaaataaaccccgaaattgtgtgtcaacaatgtctgacccc
caacatcgccgaacagtattaagctatattcaaggaattccccaacgaatttatcctgtt
gggcgattagactatgatactagtgggttattattattaacaaatgatggggaatttgca
aatattattactcatcctagtcatgttgttaataaaacataccatgttttaattaatggg
gccattagtaaaacagagttacaacaattagcccgaggagttgaaattgaaccagggatt
atttctagtccggcaacagcaaaattactaaattatgctgacaaaacaaataatgctgtg
attagtttaacaattcatgaaggaaaaaaacaccaagttaaaaggatgattgcagcggtt
ggtaaagaagttttaaaattaaaacgtgtcgcaatttcctttttagaattagatgaaaca
cttcgtccgggggaatgaagacatttaaaaccaaaagaagttaaacgcttttttggtgta
ggtgtgatagcaaaacagaaaaacaattaa
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