Spiroplasma syrphidicola: SSYRP_v1c04470
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Entry
SSYRP_v1c04470 CDS
T02677
Symbol
topA2
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyr03032
]
SSYRP_v1c04470 (topA2)
03400 DNA repair and recombination proteins [BR:
ssyr03400
]
SSYRP_v1c04470 (topA2)
Enzymes [BR:
ssyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SSYRP_v1c04470 (topA2)
DNA replication proteins [BR:
ssyr03032
]
Prokaryotic type
DNA Topoisomerases
SSYRP_v1c04470 (topA2)
DNA repair and recombination proteins [BR:
ssyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSYRP_v1c04470 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_3
Toprim_2
DUF6429
Motif
Other DBs
NCBI-GeneID:
16152895
NCBI-ProteinID:
AGM26039
UniProt:
R4UDR1
LinkDB
All DBs
Position
489985..491775
Genome browser
AA seq
596 aa
AA seq
DB search
MKYLVVLESPNKISKVKSYLEKVFPQHSFLVKASMGHITELVIKNEKYPLGIELDTMTPI
FNVVENKKDTIKQLISFANEVDKVILATDPDREGEAIAWHLQEQLKCQNKTIRLTFNEIT
EKAIENAFNNPGQLDYQLVNAQQSRQMIDRIMGFKLSNLLQKAENLKSAGRVQSVALKLI
VDTELERKEHNKLEYWTIKQEYKDKNEIELYLDQDGKEIVKDKVLNSQEKAEEVLSKITN
NLVVKEIIETEFSKNIYDAYTTSSILQDANIDLNYSSEKTTNLLQHLFENGYITYPRTDS
TRLNDDFVRAVHKFIATNYGQEYVGQYKSGKTKENVQDAHEAIRPTNINLTLDKAKKEIA
NYDEYKLYELIYINTLYALMANETGVKYKVLFSNNGYTFKLNFKKYHFTSYYDLQEIVLD
NFDYHFKVGEMITLESEWIAEQHFTKPSPRYTEHSLIKKLEIAGVGRPSTYATIMRTLIN
REYIKFDNKSIYPTEDGIKAHNLLQKYFSNIINEKYTADMEKVLDRIADGEINHIEFLKL
FYNNFILDFNNATSIIFKNSVKCSKCDVGYIIQRKSYKGNYFKACSNFPACKNIVS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatttagtcgtgttagaatcacctaacaaaatatccaaagtaaaatcttattta
gaaaaagtatttcctcagcatagttttcttgtaaaggcctcaatgggtcatattacagaa
ttagtaattaaaaatgaaaagtatccattgggaatagaattagatactatgactccaata
tttaatgttgtcgaaaacaaaaaagatactataaaacaattaattagttttgccaatgaa
gttgataaagttattttagcaactgaccctgatcgtgaaggagaagctatagcatgacat
ttacaagagcaattaaaatgtcaaaataaaacaattagattaacttttaatgaaattaca
gaaaaagcaattgaaaatgcttttaacaatccaggacaattagactatcaattagttaat
gctcaacaatcacggcaaatgattgaccgtattatggggtttaaattatctaatttatta
caaaaagctgagaatttaaaatctgctgggagagttcaatcagtagctttaaagttaatt
gtagatacagagttagaaagaaaagaacataataagttagagtactgaaccattaaacaa
gaatataaagataaaaacgaaattgaattatatttagatcaagatggtaaagaaattgtg
aaagataaagttctcaattcacaagaaaaagcagaagaagttttatctaaaattactaat
aatttagttgtaaaagaaatcattgaaaccgaatttagcaaaaacatttatgatgcatat
acaacatcaagtattttgcaagatgcaaatatagatctaaattattctagtgaaaaaaca
acaaatttattgcaacatttattcgaaaatggatatattacttatccacgaacagactct
acaagacttaacgatgattttgtacgagcagtccataaatttattgcaacaaattatggc
caagaatatgttggtcaatataaatccggtaagactaaagagaatgttcaagatgcccat
gaagcaattcgcccaacaaatattaatttaacactagataaagcaaaaaaagaaattgct
aattacgatgaatataaattatatgaattaatttacatcaataccttatatgctttaatg
gcaaatgaaactggtgttaaatataaagtattattttctaataacggatatacttttaaa
ttaaattttaaaaaatatcactttactagttattatgatttacaagaaatagttttagat
aattttgattatcattttaaagttggagaaatgataactttagaatcagaatgaattgca
gaacaacattttacaaaaccaagccctcgctatactgagcattctttaattaaaaaactt
gaaattgcaggggttggaagaccttcaacatatgccacaattatgagaaccttaattaac
cgtgaatatattaaatttgataataaaagcatttatcctactgaagatggtattaaagcc
cataatttattacaaaaatatttttcaaatattattaatgaaaagtatacggctgatatg
gaaaaggtattagacagaattgcagatggagaaattaatcatattgaatttctaaaatta
ttttataataactttattttagattttaataatgcaacaagcataatttttaaaaattca
gttaaatgtagtaaatgcgatgttggttatattattcaacgtaagagttataagggtaat
tattttaaagcatgtagtaattttccggcttgcaagaatatcgtaagttag
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