Spiroplasma syrphidicola: SSYRP_v1c05340
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Entry
SSYRP_v1c05340 CDS
T02677
Symbol
phrB
Name
(GenBank) putative deoxyribodipyrimidine photolyase protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyr03400
]
SSYRP_v1c05340 (phrB)
Enzymes [BR:
ssyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SSYRP_v1c05340 (phrB)
DNA repair and recombination proteins [BR:
ssyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SSYRP_v1c05340 (phrB)
Prokaryotic type
SSYRP_v1c05340 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
16153517
NCBI-ProteinID:
AGM26124
UniProt:
R4UE05
LinkDB
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Position
complement(566498..567793)
Genome browser
AA seq
431 aa
AA seq
DB search
MNIFIFHRDFRIEDNLGLAQLAKEEKEIYLLFILTKVQTKNNNYFSPRSFDALVYCLKQL
NEKIHINIIQSETEATAIKGLLDQGNKINKIYTNLDYSPFAINRSKQMRELAKLNNFIYR
EFNDYSLVAPETIKTSQNSYYTVFTPFWNKLKLTFNNNDIPRYPVNQFFAEKVKASDLLF
DITNLPSNDFNLPLTPEQVKKAIDSLDQDYQNQRDLLYLTNGTANISTALKFGVVSIRQC
YLWSIEKFGNFDNPFARQLAWRDFYYQATFNAQLYQQWNFSDNWNKKMTIKWTNNSDWFE
KWKKGETGFALVDAGMKQLNTTGIMHNRARMVCASFLVKNLQIDWRKGEQYFAQQLIDYD
PIINQCSWQWVAGTGFDAQPFFRIFNPELQQKKFDPQLIYCDKFLDNHDLVEKIIDYKDS
TKKALAIYDVK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttatttttcaccgtgattttagaattgaagataatcttggtcttgcccaa
ttagcaaaggaagaaaaagaaatctatttattatttattttgacaaaagtacaaacaaaa
aataataattacttttcaccgcgcagttttgatgccttggtttattgtttaaaacagtta
aacgaaaaaatccacattaatattatccaaagtgaaacagaagcaacagcgattaaagga
ttactagatcaagggaacaaaattaataaaatttatactaatcttgattactcaccattt
gccattaaccgtagtaaacaaatgcgggaattagcaaaactaaataactttatttaccgg
gaatttaacgattattccctagttgctccagaaacaataaaaactagtcaaaattcttac
tacactgtttttaccccattttgaaataaattaaaattaacttttaataataatgatatt
ccaagatatccggtaaaccaattttttgctgaaaaagtaaaagcttctgatttattattt
gatattacaaatttaccatcaaatgattttaatttaccattaacccctgaacaagttaaa
aaagcgattgatagtttagatcaagattatcaaaaccaaagagatttgttatatttaaca
aatggaacagcaaacattagcacggccttaaaatttggggttgtttcaattcgtcaatgt
tatctttgaagcatagaaaaatttggtaattttgataatccctttgcgcgacaattagca
tggagagatttttattatcaagcaacattcaatgcccaactttatcaacaatggaatttt
agtgacaattggaataaaaaaatgacaattaagtgaacaaataattctgactggtttgaa
aaatgaaaaaaaggggaaacaggttttgctttagttgatgctgggatgaaacaattaaac
acaactggtataatgcacaatcgtgctcgaatggtttgtgcctcttttttagttaaaaac
ttacaaattgattgacgaaaaggggaacaatattttgctcaacagttaatagattatgat
ccaattattaatcaatgttcatgacaatgagtcgccggaacaggatttgatgctcagcca
tttttccgaatttttaatcctgaattacaacaaaaaaaatttgacccccaattaatttac
tgtgacaaatttttagataatcatgacctagttgaaaaaattattgattataaagattca
acaaaaaaggctttagcaatttatgatgttaaataa
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