Spiroplasma syrphidicola: SSYRP_v1c06170
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Entry
SSYRP_v1c06170 CDS
T02677
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssyr
Spiroplasma syrphidicola
Brite
KEGG Orthology (KO) [BR:
ssyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssyr03016
]
SSYRP_v1c06170 (truB)
Enzymes [BR:
ssyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SSYRP_v1c06170 (truB)
Transfer RNA biogenesis [BR:
ssyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SSYRP_v1c06170 (truB)
Prokaryotic type
SSYRP_v1c06170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
T2SSB
Motif
Other DBs
NCBI-GeneID:
16153601
NCBI-ProteinID:
AGM26207
UniProt:
R4U442
LinkDB
All DBs
Position
complement(660214..661134)
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AA seq
306 aa
AA seq
DB search
MSTTMLNDGILLIDKPVGKTSNQVIQIIKKKLGVNKIGHAGTLDPLATGLLVVLLNNGTK
ISDYLLTADKGYDVTMKLFIKTDSGDITGKIMEEIAPFKMKKKVIKKAFESFNGFIYEQY
PPKYSAIKVNGKKLYEYARAEQEVQITPRTVTIQAIKFKNYNHATQTIQFSVLCSKGTYV
RSLVEDIADKMGVLATVEKLTRVQSGNFKLADAVKVEDVDQKDIISMYDALFINKQPLLM
YHYDEEIRQGKPIVIINHSDPNIFIIDKHKNVLAIYKHIGKHVYACQRGLWSNEQGPTPT
SEGDKY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacaatgttaaatgatggtattttattaattgataagccagttggtaaaact
agtaaccaagttattcaaattattaagaaaaaactaggagttaataaaattggtcatgcg
gggacccttgatccattagcaacagggttattagttgttttattgaataatggtacaaaa
atcagtgattatttattaacagcagataaaggctatgatgtcacaatgaaattgtttatt
aaaacggattctggggatataacggggaaaataatggaagaaattgccccatttaaaatg
aaaaagaaagttattaaaaaagcttttgaaagttttaatggttttatttatgaacaatat
cccccaaaatactcggcgataaaagtaaatggtaaaaaattatatgaatatgcccgcgct
gaacaggaagtacaaattacaccacgaacagtaacaattcaagcaattaaatttaaaaat
tataaccatgcaactcaaacaattcaatttagtgtcctttgttcaaagggaacatatgtt
cgtagtttagttgaagatattgccgataaaatgggagtattggcaacagttgaaaaatta
actcgtgtccagtcaggaaattttaagttagctgatgctgttaaagttgaagatgtggac
caaaaagatattatttcgatgtatgatgccttgtttattaataaacagccgttattaatg
tatcattatgatgaagaaattcgtcaaggaaaacctattgtaattattaatcatagtgat
ccaaatatttttattattgataagcataaaaatgtcttagcaatttataaacatattggt
aaacatgtatatgcttgccaacgaggattatgatcaaatgaacaaggccctacgccaacc
agtgaaggggacaagtactaa
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