Serratia symbiotica: SCc_052
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Entry
SCc_052 CDS
T01672
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthetase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssz03016
]
SCc_052 (truB)
Enzymes [BR:
ssz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCc_052 (truB)
Transfer RNA biogenesis [BR:
ssz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCc_052 (truB)
Prokaryotic type
SCc_052 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEW44242
LinkDB
All DBs
Position
complement(83445..84407)
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AA seq
320 aa
AA seq
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MEQEQRGLMSYLHHHGRSIHGILLLNKPRGLSSNDAVQKVKRLYNAKRAGHTGTLDPLAS
GMLPICLGEATKLSQFILNSDKHYRVIAKLGQSTNTLDADGTITQQRPIIFAREQLDTAL
SNFRGKIQQIPPMYSALKYQGKKLYEYARQGIKIPRQERSVTIHQLQCIRWQGDELELKI
HCSKGTYIRALVNDLGEWLNCGAHVTHLHRLQVGSYPTKCMVTLEKLYSLLKEAPKTIFS
ELLDPLLIPMDNPVKHYPEVNLLPIIAHHLKQGQYVQVTDAPTTGIVRITEGKNHKFIGI
GSITNDGHVAPKRLIFEHVD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaacagagaggtttaatgagttaccttcatcaccatggacgtagtatccat
ggtatacttttattaaataaaccccggggactatcgtctaacgacgctgtacaaaaagtt
aaacgcctatacaacgccaagcgtgctggtcatactggcacacttgatccattggcgagt
ggtatgctccctatttgtttaggtgaagcaactaaattatcacaattcatactaaactct
gacaaacattacagggtaattgctaaattagggcaaagcactaataccttagatgctgat
ggtacaatcactcaacaacgccctataatttttgctcgtgagcagcttgatacagcgctg
agtaattttcgtggtaaaatacaacaaataccaccgatgtattcagcactaaagtatcaa
ggcaagaaactctacgagtatgcacgtcaaggtatcaagataccacgtcaagaacgtagc
gtaactatacatcaactacagtgtattcgctggcaaggggatgagctagagctaaagatc
cactgctcgaaaggcacatatattcgcgctcttgttaatgatcttggcgaatggctaaac
tgtggggcacatgtaacccaccttcatcgcctacaagtaggaagctatccaacaaaatgc
atggtaacgctagaaaaactatattctttactcaaagaagctccgaaaactatatttagt
gaattactagatccattattgataccgatggataacccagttaagcactatccagaagtt
aatttattacctataatagctcatcatcttaaacaaggacagtatgtgcaagtaacagac
gcgccaaccactggtatagtgcgcataactgaaggcaaaaatcataaatttatcggcata
ggtagcattactaatgatgggcacgtagcaccaaagcgcctaatatttgaacatgtcgac
taa
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