Serratia symbiotica: SCc_070
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Entry
SCc_070 CDS
T01672
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssz03009
]
SCc_070 (rsmB)
Enzymes [BR:
ssz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SCc_070 (rsmB)
Ribosome biogenesis [BR:
ssz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SCc_070 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_37
Methyltransf_25
FtsJ
MTS
Cons_hypoth95
Methyltransf_5
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_33
Methyltransf_12
Methyltransf_4
FAM200-GTF2IRD2-like
Motif
Other DBs
NCBI-ProteinID:
AEW44258
LinkDB
All DBs
Position
complement(112616..113905)
Genome browser
AA seq
429 aa
AA seq
DB search
MKNNYNIRSHAAKIIGQVLDQGRSLNSILPTIKNNINNKDSALLQEICFGTLRMLPQLKW
FIQQLMTRPMIGKHSLIHYLLLIGLYQLLYTRIPPYAVLAETVNGAVELKYPQLKGLING
ILRQFLRQQSTLVQSASNNQCRYLHPSWLLKRIQLAYPMQWEQIINANNQKPPMWLRINR
LHHTRVQYLQLINKLGIAAKPHTTYTDALRLLTPCDVNNLPGFTDGWITIQDASAQGCIS
LLNPQNNEQILDLCAAPGGKTTHILEAAPKAKVMAIDINQQRITRIKENLQRLHLHAEIK
LGDGRTPQQWCGNKQFDRILLDAPCSASGVIRRHPDIKWLRRDCDIAKFTSLQAEILTAI
WPHLKSSGVMIYATCSILPEENSEQIAAFLKNHKNARLVETGSLELPGQQNLPHPEDGDG
FFCAKLIKI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataattataatatacgcagtcatgcggctaaaataatcggccaggtgctagat
caaggtcgatcacttaactcgatcttaccaacaataaaaaataacataaataataaagat
tctgcattattacaggagatatgcttcggcaccttacgtatgctgcctcaactaaaatgg
tttattcagcaattgatgactagaccaatgatcggtaaacacagcttaatacactattta
ctgttaattggcctctatcaactactttatacccgcatcccgccgtatgctgtgctagct
gaaacagttaatggtgcagtagaactaaaatacccacaacttaaagggttaattaacgga
atattgcgccaattcctgcgacagcaaagtacattagtacaatctgcttctaataatcaa
tgccgatacttacatccaagctggctcttaaaacgcattcagctagcttatccaatgcag
tgggaacagattataaatgctaataatcaaaaacccccaatgtggctgcgtattaaccgt
ttacatcacacaagagttcagtatctgcaattaataaataaattaggcatagccgctaaa
ccacacactacatatactgacgcactacgtcttctaactccgtgcgatgttaataaccta
cctggttttactgatggctggattactatacaagatgcctcggcacaaggctgtatctct
ttactaaatccacaaaacaacgaacaaatacttgatctatgcgcagctcctggtggtaaa
accactcatattctagaagcggccccaaaagcaaaagtcatggccattgatataaatcaa
caacgaataactcgtattaaagaaaatctacagcgcctacacttacatgctgagatcaaa
ctaggcgatggccggacaccacagcaatggtgcggcaataagcaatttgatcgtatttta
ttagatgctccttgctcagccagcggtgttattcgtcggcatcccgatataaaatggcta
cgtcgtgattgtgatatagctaagtttaccagcctacaggcagaaatactcactgcgata
tggccacatttaaaatccagtggtgtaatgatctacgctacttgttcaattcttccggaa
gaaaacagcgaacaaatcgccgccttcctgaaaaatcataaaaacgctagattagttgaa
actggtagcctagagctaccaggacaacagaatcttccacatcctgaagatggtgatgga
ttcttttgcgctaagctgattaaaatataa
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integrated database retrieval system
