Serratia symbiotica: SCc_097
Help
Entry
SCc_097 CDS
T01672
Symbol
groEL
Name
(GenBank) chaperone Hsp60
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssz
Serratia symbiotica
Pathway
ssz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCc_097 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssz03019
]
SCc_097 (groEL)
03110 Chaperones and folding catalysts [BR:
ssz03110
]
SCc_097 (groEL)
03029 Mitochondrial biogenesis [BR:
ssz03029
]
SCc_097 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssz04147
]
SCc_097 (groEL)
Enzymes [BR:
ssz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCc_097 (groEL)
Messenger RNA biogenesis [BR:
ssz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCc_097 (groEL)
Chaperones and folding catalysts [BR:
ssz03110
]
Heat shock proteins
HSP60 / Chaperonin
SCc_097 (groEL)
Mitochondrial biogenesis [BR:
ssz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCc_097 (groEL)
Exosome [BR:
ssz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCc_097 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SCc_097 (groEL)
Exosomal proteins of breast cancer cells
SCc_097 (groEL)
Exosomal proteins of colorectal cancer cells
SCc_097 (groEL)
Exosomal proteins of bladder cancer cells
SCc_097 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
AEW44283
LinkDB
All DBs
Position
complement(157491..159137)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTASVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKKLSVPCSDFKAIAQVGTISANSDETVGKLIAEAMEKVGKKGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPENGSVELESPFILLVDKKISNIREMLPILESV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGAV
ISEEIGLELEKTTIEDLGQAKRVVINKDTSTIIDGVGNEVAIKGRVAQIRQQIEEASSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKSRVEDALHATRAAVEEGVVAGGGVALI
RVAGKISNLRGDNEDQNVGIKVAMRAMESPLRQIVINAGEEASVVANNLKAGEGSYGYNA
CSEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMITDLPKTDAPDVSNTGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggcaatgatgctcgtgtgaaaatgcttcgcggagta
aatgttctagctgatgcagtaaaagtaacactaggcccaaaaggtcgtaatgtagtacta
gataaatcttttggcgctcctactatcaccaaagatggtgtatccgttgctcgtgagatc
gaattagaagataaattcgaaaacatgggcgcacaaatggtaaaagaagtagcctctaaa
gcaaatgatgcggcgggtgacggcacaacaacagcaagcgtattagctcaatccattgtt
actgaaggcctcaaggctgtagccgcaggcatgaatccaatggatctgaaacgtggtatc
gataaagctgttgtggctgcggttgaagagttaaaaaaactgtcagtaccttgttctgac
tttaaggctattgcccaagtaggtaccatatctgcaaactccgatgaaaccgtaggaaaa
ttaattgcggaagccatggaaaaagttggtaaaaaaggcgttatcactgttgaagaaggt
actggcctacaagatgagctagacgtagtggagggtatgcaatttgatcgcggctaccta
tccccttacttcattaacaaaccagaaaatggctctgtagaattagaaagcccattcatt
ctattagtggacaaaaaaatttccaacatccgtgaaatgctacctatattagaatctgta
gcaaaagctggaaaaccactactaattatcgctgaagacgttgaaggtgaagcattagct
actttagtagttaatactatgcgtggtattgtaaaagttgctgctgttaaagcaccaggt
ttcggtgatcgtcgtaaagctatgctgcaagatattgcaaccctgacaggtggcgcagtt
atctctgaagagattggtttagaattagagaaaaccacaatagaagatttgggtcaagct
aaacgcgtggtgattaataaagatacatctactataattgatggcgtaggtaatgaagtg
gccatcaaaggtcgcgtagcgcaaattcgtcaacaaatcgaagaagcgagttctgattac
gatcgcgaaaaacttcaagaacgcgtagctaaattagctggtggcgttgccgttattaaa
gttggtgcagcaactgaagttgaaatgaaagagaagaaatctcgtgttgaagatgccctt
catgcaactagagcagcggtagaagaaggcgtggttgctggtggtggtgttgctctaatc
cgtgtagcaggcaaaattagcaacctgagaggtgacaatgaagatcaaaatgttggcatt
aaggttgcaatgcgtgcaatggaatctccattacgccaaattgtaattaatgctggtgaa
gaagcttctgttgttgctaataacctaaaagcaggggaaggtagctacggttataatgct
tgctctgaagagtatggcgacatgattgcgatgggtatcttggatccaactaaagtaacc
cgctctgctctacagtatgcggcttctgtggctggcctcatgattactactgaatgcatg
attaccgatcttccaaaaactgatgcacctgatgtaagtaatactggtggcatgggtggc
atgggtggcatgggtggcatgatgtaa
DBGET
integrated database retrieval system
