Serratia symbiotica: SCc_117
Help
Entry
SCc_117 CDS
T01672
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ssz
Serratia symbiotica
Pathway
ssz00240
Pyrimidine metabolism
ssz00250
Alanine, aspartate and glutamate metabolism
ssz01100
Metabolic pathways
ssz01110
Biosynthesis of secondary metabolites
ssz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SCc_117 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SCc_117 (carB)
00220 Arginine biosynthesis
SCc_117 (carB)
Enzymes [BR:
ssz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SCc_117 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
HTH_23
BamE
Motif
Other DBs
NCBI-ProteinID:
AEW44298
LinkDB
All DBs
Position
205617..208841
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRIDIQSILILGAGPIVIGQACEFDYSGAQACKALRAEGYRIILVNSNPATIMTDPDM
ADSTYIEPIHWKVVRKIIEKERPTALLPTMGGQTALNCALDLERQGVLAEFDVMMIGATA
DVINKAEDRCRFDIAMKKIGLNTAYSGIAHTIEEALIVAAEVGFPCIIRPSFTMGGAGGG
IAYNREEFEDICQSGFDLSPTKELLIDESLIGWKEYELEVVRDKNDNCIIICSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRDASMAVLREIGVEAGGANVQFSVNPKTGRLIVIEM
NPRVSRSSALASKVTGFPIAKIAAKLAVGYTLDELMNDITGGLTPAAFEPSLDYVVTKIP
RFNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRSLEVGATGFDPKVNLDDPEA
LTIIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLTQIEELVRLEEQVVEVG
INGLKAVFLRALKRKGFSDARLANLVGVSESQIYKLRHSYSLHPVYKRVDTCAAEFATNT
AYMYSTYEEECESNPITGRLKVMVLGGGPNRIGQGIEFDYCCVHAAIALRQDGYETIIVN
CNPETVSTDYDISDRLYFEPVSLEDVLEIARIEQPVGVIVQYGGQTPLKLARALEAAGVP
IIGTSPDSIDRAEDRARFQQVVNRLGLRQPANATVSTVDQAAEQAMVIGYPLVVRPSYVL
GGRAMEIAYDEMDLRRYFQHAVNVSNDAPVLLDRFLSDAIEVDIDVICDGECVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEELAFELQVRGLMNVQFAVKNHDVYVI
EVNPRAARTVPFVSKATGVPLAKVAARVMMGKTLVEQGITKEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGCTFAEAFSKAMFSSESGMKKEGRVLLSVRDGDKERVVDL
AIILLNQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVNYDTTLNGGFATAMALKADPTEKVVSVQEMHASLYK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtattgatatacaaagtatcctgattcttggcgctggcccaatagttatt
gggcaggcgtgtgagttcgattattcaggtgctcaggcgtgtaaagcgttacgtgcagaa
gggtaccgcattattcttgttaactcaaatccagccactattatgactgacccagatatg
gccgattctacctatattgagccaatacactggaaagtggtacgtaaaattatcgaaaaa
gagcgacctactgcattgttgccaactatgggtggccagacggcgttgaattgtgcttta
gacctagagcgccaaggtgtgttagctgagtttgatgtcatgatgattggcgctactgct
gatgtgatcaataaggcagaagatcgatgtcgttttgatatagcaatgaaaaaaataggc
cttaataccgcgtactctggtattgcgcatactatagaagaggccttaatagttgctgca
gaagtgggtttcccatgcattatccgtccttcttttaccatgggtggagctggtggtggt
atagcctacaatcgagaagaatttgaagatatttgtcagtctggctttgatctttcgcca
actaaagaactattaattgatgaatcgctcatcggttggaaagagtatgagttggaagta
gtgcgtgataaaaatgacaattgtataattatttgttcgatagaaaattttgatgctatg
ggtattcacacgggggattctattactgttgcgccggctcagactttaactgataaagag
taccagattatgcgtgatgcttctatggcagttctacgtgaaattggcgttgaagctggt
ggcgctaatgtgcaattctctgttaatcccaaaacaggtcgcttgattgtgattgaaatg
aatcctcgagtgtcacgctcttctgcgttagcttctaaagtaactggatttcccatcgct
aagattgctgctaaattagctgttggatatacccttgacgaactaatgaacgatataacc
ggcggccttactcctgctgcatttgagccttctctggactatgttgtaacaaaaattcct
cgttttaattttgagaaatttgtcggagctaatgaccgactaacaacgcagatgaagtcg
gtaggtgaagtaatggcgattggccgtactcagcaggaatctttacagaaagcattacgt
agtttagaggtaggagccactggttttgatccaaaagtaaatcttgatgatccggaggca
ttaactatcattcgtcgtgagctaaaagacgctggagcagatcgtatttggtatatagct
gatgcttttcgcgcagggctatcagtagatggtgtatttaatttaactaatatcgatcgt
tggttcttgacgcagattgaagaacttgtgcgtttagaggagcaggtagtagaggtcggt
ataaatggcttgaaggccgtatttttgcgtgctttgaaacgtaaaggtttttctgatgcg
cgtctggctaacttagtaggtgtctctgagagtcaaatttataagttgcgacacagctat
agcctgcatccagtatataagcgcgtagatacttgtgcggcagaatttgccactaatacc
gcatatatgtattctacgtatgaggaagaatgtgaatctaacccaattacgggacgttta
aaggtaatggtgctaggcggcgggcctaatcgtattggccaaggtatagagtttgactat
tgttgcgtacacgctgcaatagctctacgtcaagatggttatgagactattatagttaac
tgcaacccagaaactgtctcaaccgactatgatatctctgatcgcttatattttgaacca
gtatcattagaggacgtattagaaatcgcgcgtatagaacagccagtaggtgtaattgta
caatatggcggtcagaccccattaaagttagcgcgtgcattagaagccgcaggagtaccg
attatcggcactagcccggattcaattgatcgagccgaagatcgtgcgcgttttcagcag
gtagtaaatcgtctaggactcaggcagccagcgaatgctactgtgagcaccgtggatcag
gcagcagagcaggcaatggttattggttatccattagtagtacgcccttcctatgtactg
ggagggcgggcaatggaaattgcatacgatgaaatggatttgcgtcgttactttcagcat
gcggttaacgtatctaatgatgcgcctgtattattagatcgttttttaagtgatgcaata
gaagtagatattgatgttatctgtgatggtgaatgtgtgctaattggtggtattatggaa
catattgagcaggcaggagtgcattctggcgactcagcatgttctttaccagcttatact
cttagtaaagagattcaggatgtaatgcgtcagcaagtggaagagttagcatttgagtta
caagtacgaggcctcatgaatgtacagtttgcagtaaaaaatcatgacgtctatgtgatt
gaagtgaatccacgtgccgcgcgtactgttccttttgtctcgaaagctactggcgtgcca
ttagctaaggttgctgcgcgagtaatgatgggtaaaactttagttgagcaaggaataact
aaagaggttatcccgccttattactctgtaaaggaagtagtattaccatttaataaattt
cctggagttgatccgatcttagggccagaaatgcgctctactggagaagtaatgggagta
gggtgtacctttgctgaggccttctctaaggcgatgtttagcagcgaatcaggtatgaaa
aaagaaggtcgcgttttattatctgtacgcgatggcgataaagaacgtgtagtagattta
gcaattattttattaaatcaaggttttgagttagatgctactcatggtaccgcaattgtt
ttgggtgaagcaggtattaacccgcgtctagttaataaggttcatgaaggtcgcccacat
atccaagatcgtattaaaaatggtgagtacacttatattgttaatacaactgcgggtaga
caggcaattgaagattccaagttaattcgtcgcagtgcactgcaatataaggttaattat
gatactacgttgaatggtgggtttgctactgcaatggcattaaaggctgatccaactgag
aaggtggtttcggtgcaggagatgcacgctagcttatataagtaa
DBGET
integrated database retrieval system
